amiC:Quickview: Difference between revisions
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2813, b2817, JW5449, ygdN''<ref name='LIB:Riley_2006'/> | ''ECK2813, b2817, JW5449, ygdN''<ref name='LIB:Riley_2006'/>, ygdN'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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N-acetylmuramoyl-L-alanine amidase<ref name='LIB:Riley_2006'/>, B2817<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgdN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AmiC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''N-acetylmuramoyl-L-alanine amidase<ref name='LIB:Riley_2006'/>, B2817<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgdN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AmiC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK2813, JW5449, ygdN, b2817'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=amiC&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=amiC&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G7458]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120004021&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=amiC&loc=BW2952%3A2832927..2834180,MG1655%3A2947032..2945779,W3110%3A2947666..2946413,REL606%3A2843629..2842376,DH10B%3A3040902..3039649]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3040902&end=3039649&gene=amiC&aa=mtdyasfakvsgqisrllvtqlrflllgrgmsgsntaisrrrllqgagamwllsvsqvslaavsqvvavrvwpassytrvtvesnrqlkykqfalsnpervvvdiedvnlnsvlkgmaaqiraddpfiksarvgqfdpqtvrmvfelkqnvkpqlfalapvagfkerlvmdlypanaqdmqdpllalledynkgdlekqvppaqsgpqpgkagrdrpivimldpghggedsgavgkyktrekdvvlqiarrlrsliekegnmkvymtrnedifiplqvrvakaqkqradlfvsihadaftsrqpsgssvfalstkgatstaakylaqtqnasdliggvsksgdryvdhtmfdmvqsltiadslkfgkavlnklgkinklhknqveqagfavlkapdipsilvetafisnveeerklktatfqqevaesilagikayfadgatlarrg]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=amiC+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=amiC]] | ||
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Latest revision as of 21:53, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
amiC |
|---|---|
| Gene Synonym(s) |
ECK2813, b2817, JW5449, ygdN[1], ygdN |
| Product Desc. |
N-acetylmuramyl-L-alanine amidase[2][3] N-acetylmuramyl-L-alanine amidase, periplasmic; recruited to the septal ring by FtsN during cell division; overexpression causes lysis[4] |
| Product Synonyms(s) |
N-acetylmuramoyl-L-alanine amidase[1], B2817[2][1], YgdN[2][1], AmiC[2][1] , ECK2813, JW5449, ygdN, b2817 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype |
Septation defect[5]. Increases the number of cells in chains |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Verified Tat substrate: AmiC has a predicted Tat-only (Class I) 31 aa signal peptide (Tullman-Ercek, 2007). N-terminal domain is septal targeting domain. Ize (2003) incorrectly report a predicted 33 aa signal peptide in the text, but correctly depict a predicted 31 aa signal peptide in Fig. 4A. Divisome, non-essential.[4]
References
See Help:References for how to manage references in EcoliWiki.
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ Priyadarshini, R et al. (2006) Daughter cell separation by penicillin-binding proteins and peptidoglycan amidases in Escherichia coli. J. Bacteriol. 188 5345-55 PubMed