copA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0478, b0484, JW0473, ybaR''<ref name='LIB:Riley_2006'/>
''ECK0478, b0484, JW0473, ybaR''<ref name='LIB:Riley_2006'/>, ybaR''
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!align=left {{table_heading_style}} |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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copper transporter<ref name='LIB:Riley_2006'/>, B0484<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CopA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
''copper transporter<ref name='LIB:Riley_2006'/>, B0484<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YbaR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CopA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK0478, JW0473, ybaR, b0484''
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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Quick Links
!align=left {{table_heading_style}} |Quick Links
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[http://porteco.org/AjaxSearch.jsp?searchString=copA&s=search PortEco search(copA)]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_dna.php?gene=copA&loc=MG1655:510603..508099,W3110:510603..508099,DH10B:449934..447430,REL606:483547..481043,BW2952:410858..413362 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=410858&end=413362&gene=copA&aa= Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=copA+AND+escherichia+coli Pubmed(copA)]&nbsp;&nbsp;&nbsp; [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=copA Textpresso(copA)]
[[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=copA&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=G6260]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120002868&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=copA&loc=MG1655%3A510603..508099,W3110%3A510603..508099,DH10B%3A449934..447430,REL606%3A483547..481043,BW2952%3A410858..413362]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=410858&end=413362&gene=copA&aa=msqtidltldglscghcvkrvkesleqrpdveqadvsiteahvtgtasaeqlietikqagydasvshpkakplaessipsealtavsealpaataddddsqqlllsgmscascvtrvqnalqsvpgvtqarvnlaertalvmgsaspqdlvqavekagygaeaieddakrrerqqetavatmkrfrwqaivalavgipvmvwgmigdnmmvtadnrslwlviglitlavmvfagghfyrsawksllngaatmdtlvalgtgvawlysmsvnlwpqwfpmearhlyyeasamiiglinlghmleararqrsskaleklldltpptarlvtdegeksvplaevqpgmllrlttgdrvpvdgeitqgeawldeamltgepipqqkgegdsvhagtvvqdgsvlfrasavgshttlsriirmvrqaqsskpeigqladkisavfvpvvvvialvsaaiwyffgpapqivytlviattvliiacpcalglatpmsiisgvgraaefgvlvrdadalqrastldtvvfdktgtltegkpqvvavktfadvdeaqalrlaaaleqgsshplaraildkagdmqlpqvngfrtlrglgvsgeaeghalllgnqallneqqvgtkaieaeitaqasqgatpvllavdgkavallavrdplrsdsvaalqrlhkagyrlvmltgdnpttanaiakeagideviagvlpdgkaeaikhlqsegrqvamvgdgindapalaqadvgiamgggsdvaietaaitlmrhslmgvadalaisratlhnmkqnllgafiynsigipvaagilwpftgtllnpvvagaamalssitvvsnanrllrfkpke]]&nbsp;&nbsp; [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=copA+AND+escherichia+coli]]&nbsp;&nbsp; [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=copA]]&nbsp;&nbsp;


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Latest revision as of 21:52, 27 May 2013

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions
Standard Name

copA

Gene Synonym(s)

ECK0478, b0484, JW0473, ybaR[1], ybaR

Product Desc.

YbaR[2]; Cu+-exporting ATPase[3]

Copper-, silver-translocating P-type ATPase efflux pump; involved in copper resistance; copper- and silver-inducible; regulated by copper-responsive CueR activator[4]

Product Synonyms(s)

copper transporter[1], B0484[2][1], YbaR[2][1], CopA[2][1] , ECK0478, JW0473, ybaR, b0484

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): copA[2]

Regulation/Activity
Quick Links



        

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Notes

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Upregulated by GSNO in defined medium (anaerobic). HAD superfamily. CopA contains a putative phosphatase HAD domain: residues 516-740.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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