deaD:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3150, b3162, JW5531, mssB, rhlD''<ref name='LIB:Riley_2006'/> | ''ECK3150, b3162, JW5531, mssB, rhlD''<ref name='LIB:Riley_2006'/>, csdA, rhlD'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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ATP-dependent RNA helicase<ref name='LIB:Riley_2006'/>, B3162<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhlD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MssB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DeaD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''ATP-dependent RNA helicase<ref name='LIB:Riley_2006'/>, B3162<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RhlD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MssB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DeaD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , csdA, ECK3150, JW5531, mssB, rhlD, b3162'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=deaD&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=deaD&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10215]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120000209&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=deaD&loc=MG1655%3A3305882..3303993,W3110%3A3307715..3305826,DH10B%3A3403627..3401738,REL606%3A3243094..3241205,BW2952%3A3191141..3193030]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3191141&end=3193030&gene=deaD&aa=mmsyvdwpplilrhtyymaefettfadlglkapilealndlgyekpspiqaeciphllngrdvlgmaqtgsgktaafslpllqnldpelkapqilvlaptrelavqvaeamtdfskhmrgvnvvalyggqrydvqlralrqgpqivvgtpgrlldhlkrgtldlsklsglvldeademlrmgfiedvetimaqipeghqtalfsatmpeairritrrfmkepqevriqssvttrpdisqsywtvwgmrknealvrfleaedfdaaiifvrtknatlevaealerngynsaalngdmnqalreqtlerlkdgrldiliatdvaargldverislvvnydipmdsesyvhrigrtgragragrallfvenrerrllrniertmkltipevelpnaellgkrrlekfaakvqqqlessdldqyrallskiqptaegeeldletlaaallkmaqgertlivppdapmrpkrefrdrddrgprdrndrgprgdredrprrerrdvgdmqlyrievgrddgvevrhivgaianegdissryigniklfashstielpkgmpgevlqhftrtrilnkpmnmqllgdaqphtggerrgggrgfggerreggrnfsgerreggrgdgrrfsgerregraprrddstgrrrfggda]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=deaD+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=deaD]] | ||
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Latest revision as of 21:51, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
deaD |
|---|---|
| Gene Synonym(s) |
ECK3150, b3162, JW5531, mssB, rhlD[1], csdA, rhlD |
| Product Desc. |
CsdA, DEAD-box RNA helicase[2][3] Translation factor W2, putative RNA helix-destabilizer; facilitates translation of mRNAs with 5' secondary structures; multicopy suppressor of rpsB(Ts) mutations[4] |
| Product Synonyms(s) |
ATP-dependent RNA helicase[1], B3162[2][1], RhlD[2][1], MssB[2][1], DeaD[2][1] , csdA, ECK3150, JW5531, mssB, rhlD, b3162 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Mechanism of DeaD 50S biogenesis differs from that for SrmB 50S biogenesis. stabilizes exposed mRNA, possibly by protecting or destabilizing secondary structure of RNase E sites. Cold shock-inducible; acid-inducible.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.