fdoG:Quickview: Difference between revisions
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* ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | * ** PLEASE DON'T EDIT THIS TABLE DIRECTLY. Use the edit table link under the table. ** | ||
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!align=left {{table_heading_style}} |Gene Synonym(s) | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3887, b3894, JW3865''<ref name='LIB:Riley_2006'/> | ''ECK3887, b3894, JW3865''<ref name='LIB:Riley_2006'/>, JW3865'' | ||
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!align=left {{table_heading_style}} |Product Desc. | !align=left {{table_heading_style}} |Product Desc. | ||
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!align=left {{table_heading_style}} |Product Synonyms(s) | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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formate dehydrogenase-O, large subunit<ref name='LIB:Riley_2006'/>, B3894<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FdoG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ''formate dehydrogenase-O, large subunit<ref name='LIB:Riley_2006'/>, B3894<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, FdoG<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> , ECK3887, JW3865, b3894'' | ||
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!align=left {{table_heading_style}} |Function from GO | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=fdoG&s=search | [[File:porteco.png|link=http://porteco.org/AjaxSearch.jsp?searchString=fdoG&s=search]] [[File:EcoCyc.gif|link=http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG11858]] [[File:regulondb.jpg|link=http://regulondb.ccg.unam.mx/gene?term=ECK120001789&organism=ECK12&format=jsp&type=gene ]] <br/><br/> [[File:dnadisplay.png|link=http://ecoliwiki.net/tools/display_dna.php?gene=fdoG&loc=MG1655%3A4083845..4080795,W3110%3A3550859..3553909,DH10B%3A4183542..4180492,REL606%3A4063969..4060919,BW2952%3A3970464..3973514]] [[File:proteindisplay.png|link=http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3970464&end=3973514&gene=fdoG&aa=mqvsrrqffkicaggmagttaaalgfapsvalaetrqykllrtretrntctycsvgcgllmyslgdgaknakasifhiegdpdhpvnrgalcpkgaglvdfihsesrlkfpeyrapgsdkwqqisweeafdriaklmkedrdanyiaqnaegvtvnrwlstgmlcasassnetgyltqkfsralgmlavdnqarvhgptvaslaptfgrgamtnhwvdiknanlvvvmggnaaeahpvgfrwameakihngaklividprftrtaavadyyapirsgtdiaflsgvllyllnnekfnreyteaytnaslivredygfedglftgydaekrkydksswtyeldengfakrdttlqhprcvwnllkqhvsrytpdvvenicgtpkdaflkvceyiaetsahdktasflyalgwtqhsvgaqnirtmamiqlllgnmgmagggvnalrghsniqgltdlgllsqslpgymtlpsekqtdlqtyltantpkpllegqvnywgnypkffvsmmkaffgdkataenswgfdwlpkwdkgydvlqyfemmkegkvngyicqgfnpvasfpnknkvigclsklkflvtidplntetsnfwqnhgelnevdsskiqtevfrlpstcfaeengsivnsgrwlqwhwkgadapgialtdgeilsgiflrlrkmyaeqgganpdqvlnmtwnyaiphepsseevamesngkaladitdpatgavivkkgqqlssfaqlrddgttscgcwifagswtpegnqmarrdnadpsglgntlgwawawplnrrilynrasadpqgnpwdpkrqllkwdgtkwtgwdipdysaappgsgvgpfimqqegmgrlfaldkmaegpfpehyepfetplgtnplhpnvisnpaarifkddaealgkadkfpyvgttyrltehfhywtkhallnailqpeqfveigeslanklgiaqgdtvkvssnrgyikakavvtkrirtlkangkdidtigipihwgyegvakkgfiantltpfvgdantqtpefksflvnvekv]] [[File:pubmed.jpg|link=http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=fdoG+AND+escherichia+coli]] [[File:textpresso.jpg|link=http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=fdoG]] | ||
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Latest revision as of 21:51, 27 May 2013
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
| Standard Name |
fdoG |
|---|---|
| Gene Synonym(s) |
ECK3887, b3894, JW3865[1], JW3865 |
| Product Desc. |
formate dehydrogenase-O, α subunit[2][3]; Component of formate dehydrogenase-O[2][3] Formate dehydrogenase-O, selenopeptide, aerobic[4] |
| Product Synonyms(s) |
formate dehydrogenase-O, large subunit[1], B3894[2][1], FdoG[2][1] , ECK3887, JW3865, b3894 |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): fdoGHI-fdhE[2] |
| Regulation/Activity | |
| Quick Links |
|
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Also known as FDH-Z. Verified Tat substrate: FdoG has a predicted Tat-only (Class I) 33 aa signal peptide (Tullman-Ercek, 2007). Binds TrxA (Kumar, 2004). HT_Cmplx13_Mem: FdoG+FdoH. The UGA stop codon 196 is translated as selenocysteine in vivo and indicated as a "U" in the protein sequence.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.