yfbT:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older edit
touch
touch
 
Line 29: Line 29:
*  
*  
****************************************************************************************** -->{{Evolution_homologs_table_help}}
****************************************************************************************** -->{{Evolution_homologs_table_help}}
{|   id="H46abd8904f01d"  class=" tableEdit Evolution_homologs_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="H46abd8904f01d"  class=" tableEdit Evolution_homologs_table"   
|- {{table heading style}}
|- {{table heading style}}
!|Organism!!Homologs (Statistics)!!Comments
!|Organism!!Homologs (Statistics)!!Comments
Line 131: Line 131:
*  
*  
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|   id="T46abd89997bf4"  class=" tableEdit Gene_accessions_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="T46abd89997bf4"  class=" tableEdit Gene_accessions_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
Line 148: Line 148:
|
|
   
   
|-
|
[[EcoCyc]]
|
EcoCyc:G7187
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EcoGene]]
|
EcoGene:EG14104
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[RegulonDB]]
|
RegulonDB:ECK120003762
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[EchoBASE]]
|
EchoBASE:EB3857
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]
|-
|
[[ASAP]]
|
ASAP:ABE-0007567
|
''Escherichia coli'' str. K-12 substr. [[:Category:Strain:MG1655|MG1655]]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  
Line 167: Line 202:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{|   id="B46a81de7cd2ec"  class=" tableEdit Links_table"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="B46a81de7cd2ec"  class=" tableEdit Links_table"   
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Name!!URL!!Comments
!|Name!!URL!!Comments

Latest revision as of 08:34, 27 May 2013

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Arabidopsis thaliana

  • AT4G21470 (score: 1.000; bootstrap: 78%)
  • AT4G25840 (score: 0.077)
  • AT5G57440 (score: 0.076)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00042333 (score: 1.000; bootstrap: 100%)
  • WBGene00023956 (score: 0.787)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00020113 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0031335 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Oryza gramene

  • Q652P6 (score: 1.000; bootstrap: 59%)
  • Q7XTZ9 (score: 0.239)
  • Q9FUN1 (score: 0.236)
  • Q8S485 (score: 0.236)
  • Q60DU2 (score: 0.086)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YHR044C (score: 1.000; bootstrap: 91%)
  • YHR043C (score: 0.913)
  • YIL053W (score: 0.056)
  • YER062C (score: 0.051)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000040945 (score: 1.000; bootstrap: 71%)

From Inparanoid:20070104

Shigella flexneri

YFBT

From SHIGELLACYC

E. coli O157

YFBT

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00702 haloacid dehalogenase-like hydrolase

Superfamily (EcoliWiki Page)

SUPERFAMILY:56784

EcoCyc

EcoCyc:G7187

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG14104

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120003762

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3857

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0007567

Escherichia coli str. K-12 substr. MG1655

edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=yfbT:Evolution&oldid=1390609"