Help:Gbrowse/Uploading user data to EcoliWiki Gbrowse: Difference between revisions
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==Uploading a Custom Track== | ==Uploading a Custom Track== | ||
Before uploading a track, in drop-down <span style="color:blue"> Data Source </span> tab, choose the correct organism that you wish your track to be displayed on. Next, click on the | Before uploading a track, in drop-down <span style="color:blue"> Data Source </span> tab, choose the correct organism that you wish your track to be displayed on. Next, click on the | ||
<span style="color:blue"> Custom Track </span> tab. Data can be uploaded as a <span style="color:blue"> variableStep Wig file</span>. | <span style="color:blue"> Custom Track </span> tab. Data can be uploaded as a <span style="color:blue"> variableStep Wig file</span>. variableStep wig files start with a declaration line starting with the word variableStep and followed by a specification for a chromosome, and the span. Preceding the declaration line are the data lines, which consist of a position, tabbed space, and a data value. For more information on variableStep wiggle files, look [http://genome.ucsc.edu/goldenPath/help/wiggle.html here]. | ||
Revision as of 16:57, 2 May 2012
Using User Accounts
User account is a feature in GBrowse that allows a user to upload custom tracks with a variety of permissions.
Creating an account
In the top right corner of GBrowse, click the Log in/create account tab. This will open a box; click on the Register option and fill out the requested information. A verification email will be sent to the given email address. Click the given link to finalize your account sign-up.
Uploading a Custom Track
Before uploading a track, in drop-down Data Source tab, choose the correct organism that you wish your track to be displayed on. Next, click on the Custom Track tab. Data can be uploaded as a variableStep Wig file. variableStep wig files start with a declaration line starting with the word variableStep and followed by a specification for a chromosome, and the span. Preceding the declaration line are the data lines, which consist of a position, tabbed space, and a data value. For more information on variableStep wiggle files, look here.