ybeX:Evolution: Difference between revisions

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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF00571 PF00571 CBS domain]
[http://pfam.janelia.org/family/PF03471 PF03471 Transporter associated domain]
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
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[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54631 SUPERFAMILY:54631]
[http://pfam.janelia.org/family/PF00571 PF00571  CBS domain]
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[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/ Superfamily] ([[Superfamily|EcoliWiki Page]])
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[http://pfam.janelia.org/family/PF03471 PF03471  Transporter associated domain]
[http://supfam.cs.bris.ac.uk/SUPERFAMILY/cgi-bin/genome.cgi?sf=54631 SUPERFAMILY:54631]
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Revision as of 20:12, 16 August 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Caenorhabditis briggsae

  • YP_026171 (score: 1.000; bootstrap: 100%)
  • WBGene00035721 (score: 1.000; bootstrap: 100%)
  • WBGene00023760 (score: 0.221)
  • WBGene00034721 (score: 0.055)

From Inparanoid:20070104

Dictyostelium discoideum

  • YP_026171 (score: 0.060)
  • DDB0206299 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YP_026171 (score: 1.000; bootstrap: 100%)
  • YOL060C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • YP_026171 (score: 1.000; bootstrap: 100%)
  • SPCC4B33c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000128918 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000145364 (score: 0.294)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003869001 (score: 1.000; bootstrap: 100%)
  • GSTENP00010692001 (score: 0.424)
  • GSTENP00025339001 (score: 0.291)
  • GSTENP00025350001 (score: 0.276)
  • GSTENP00025330001 (score: 0.211)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000009581 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

YBEX

From SHIGELLACYC

E. coli O157

YBEX

From ECOO157CYC

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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03471 Transporter associated domain

Pfam (EcoliWiki Page)

PF00571 CBS domain

Pfam (EcoliWiki Page)

PF00571 CBS domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:54631

Superfamily (EcoliWiki Page)

SUPERFAMILY:54631


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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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