ybeX:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Caenorhabditis briggsae

  • YP_026171 (score: 1.000; bootstrap: 100%)
  • WBGene00035721 (score: 1.000; bootstrap: 100%)
  • WBGene00023760 (score: 0.221)
  • WBGene00034721 (score: 0.055)

From Inparanoid:20070104

Dictyostelium discoideum

  • YP_026171 (score: 0.060)
  • DDB0206299 (score: 1.000; bootstrap: 80%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YP_026171 (score: 1.000; bootstrap: 100%)
  • YOL060C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • YP_026171 (score: 1.000; bootstrap: 100%)
  • SPCC4B33c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000128918 (score: 1.000; bootstrap: 100%)
  • NEWSINFRUP00000145364 (score: 0.294)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00003869001 (score: 1.000; bootstrap: 100%)
  • GSTENP00010692001 (score: 0.424)
  • GSTENP00025339001 (score: 0.291)
  • GSTENP00025350001 (score: 0.276)
  • GSTENP00025330001 (score: 0.211)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000009581 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Shigella flexneri

YBEX

From SHIGELLACYC

E. coli O157

YBEX

From ECOO157CYC


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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF03471 Transporter associated domain

Pfam (EcoliWiki Page)

PF00571 CBS domain

Pfam (EcoliWiki Page)

PF00571 CBS domain

Superfamily (EcoliWiki Page)

SUPERFAMILY:54631

Superfamily (EcoliWiki Page)

SUPERFAMILY:54631

EcoCyc

EcoCyc:G6361

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13654

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120002968

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB3418

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0002252

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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