curA:Evolution: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Data loaded by TableEdit_Loader.
updating gene-centric page tabs
Line 10: Line 10:
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
-->{{#css:Suppresslinks.css}}<css>{{:Suppresslinks.css}}</css>
<noinclude>{{TabsTop}}
<noinclude>{{TabsTop}}
{{Tab|Quickview|yncB}}{{Tab|Gene|yncB}}{{Tab|Gene Product(s)|yncB}}{{Tab|Expression|yncB}}{{Tab On|Evolution|yncB}}{{Tab|On One Page|yncB}}{{TabsBottom}}
{{Tab|Quickview|curA}}{{Tab|Gene|curA}}{{Tab|Gene Product(s)|curA}}{{Tab|Expression|curA}}{{Tab On|Evolution|curA}}{{Tab|On One Page|curA}}{{TabsBottom}}
{|
{|
|-  
|-  
Line 256: Line 256:
|- {{table_heading_style}}
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF00107 PF00107  Zinc-binding dehydrogenase]
|
|-  
|-  
|
|
Line 275: Line 282:
|
|
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11695:SF313 PTHR11695:SF313]
[http://www.pantherdb.org/panther/family.do?clsAccession=PTHR11695:SF313 PTHR11695:SF313]
|
|-
|
[http://pfam.janelia.org/ Pfam] ([[Pfam|EcoliWiki Page]])
|
[http://pfam.janelia.org/family/PF00107 PF00107  Zinc-binding dehydrogenase] 
|
|
   
   

Revision as of 21:18, 30 July 2011

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
Homologs Families Links References Suggestions

Homologs in Other Organisms

[back to top]


See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000020750 (score: 1.000; bootstrap: 99%)
  • ENSANGP00000012490 (score: 0.372)

From Inparanoid:20070104

Apis mellifera

  • ENSAPMP00000006907 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G16990 (score: 1.000; bootstrap: 99%)
  • AT5G16970 (score: 0.874)
  • AT5G17000 (score: 0.872)
  • AT3G03080 (score: 0.729)
  • AT1G26320 (score: 0.712)
  • AT5G37940 (score: 0.667)
  • AT5G37980 (score: 0.665)
  • AT5G16960 (score: 0.660)
  • AT5G38000 (score: 0.643)
  • AT3G59845 (score: 0.498)
  • AT5G16980 (score: 0.432)
  • AT1G65560 (score: 0.348)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000014649 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00025949 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00010911 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Canis familiaris

  • ENSCAFP00000004469 (score: 1.000; bootstrap: 66%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000004207 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-041212-80 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-041212-89 (score: 1.000; bootstrap: 99%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0231606 (score: 1.000; bootstrap: 100%)
  • DDB0186921 (score: 0.350)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000031994 (score: 1.000; bootstrap: 49%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000311572 (score: 1.000; bootstrap: 53%)
  • ENSP00000339034 (score: 0.605)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000016746 (score: 1.000; bootstrap: 99%)
  • ENSMMUP00000015080 (score: 0.544)
  • ENSMMUP00000025928 (score: 0.405)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000005764 (score: 1.000; bootstrap: 53%)

From Inparanoid:20070104

Mus musculus

  • MGI:1914353 (score: 1.000; bootstrap: 60%)

From Inparanoid:20070104

Oryza gramene

  • Q53LC7 (score: 1.000; bootstrap: 99%)
  • Q7XUK3 (score: 0.422)
  • Q8S0M7 (score: 0.344)
  • Q69XJ5 (score: 0.128)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000011071 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000020335 (score: 1.000; bootstrap: 98%)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YML131W (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPAPB24D38c (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000128105 (score: 1.000; bootstrap: 56%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00025902001 (score: 1.000; bootstrap: 62%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000032291 (score: 1.000; bootstrap: 86%)

From Inparanoid:20070104

Shigella flexneri

YNCB

From SHIGELLACYC

E. coli O157

YNCB

From ECOO157CYC

edit table


Do-It-Yourself Web Tools


Notes

Families

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00107 Zinc-binding dehydrogenase

Superfamily (EcoliWiki Page)

SUPERFAMILY:50129

Superfamily (EcoliWiki Page)

SUPERFAMILY:51735

Panther (EcoliWiki Page)

PTHR11695:SF313


edit table


Notes

Links

[back to top]



References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

[back to top]


Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=curA:Evolution&oldid=1281823"