secM:Quickview: Difference between revisions
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[http://porteco.org/AjaxSearch.jsp?searchString=secM&s=search PortEco search(secM)] [http://ecoliwiki.net/tools/display_dna.php?gene=secM&loc=MG1655:107705..108217,W3110:107705..108217,DH10B:81809..82321,BW2952:107704..108216 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=107704&end=108216&gene=secM&aa=mlwtagfndkicalntfeydrdgnnvsgiltrwrqfgkryfwphlllgmvaaslglpalsnaaepnapakattrnhepsakvnfgqlalleantrrpnsnysvdywhqhairtvirhlsfamapqtlpvaeeslplqaqhlalldtlsalltqegtpsekgyridyahftpqakfstpvwisqaqgiragpqrlt Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=secM+AND+escherichia+coli Pubmed(secM)] [http:// | [http://porteco.org/AjaxSearch.jsp?searchString=secM&s=search PortEco search(secM)] [http://ecoliwiki.net/tools/display_dna.php?gene=secM&loc=MG1655:107705..108217,W3110:107705..108217,DH10B:81809..82321,BW2952:107704..108216 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=107704&end=108216&gene=secM&aa=mlwtagfndkicalntfeydrdgnnvsgiltrwrqfgkryfwphlllgmvaaslglpalsnaaepnapakattrnhepsakvnfgqlalleantrrpnsnysvdywhqhairtvirhlsfamapqtlpvaeeslplqaqhlalldtlsalltqegtpsekgyridyahftpqakfstpvwisqaqgiragpqrlt Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=secM+AND+escherichia+coli Pubmed(secM)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=secM Textpresso(secM)] | ||
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Revision as of 18:28, 27 June 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
secM |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
secretion monitor that regulates SecA translation (General Secretory Pathway)[2][3] Secretion monitor controlling secA expression[4] |
| Product Synonyms(s) |
regulator of secA translation[1], B0097[2][1], SrrA[2][1], SecM[2][1], YacA[2][1], Gene X[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): secMA-mutT[2] |
| Regulation/Activity | |
| Quick Links |
PortEco search(secM) DNA display Protein display Pubmed(secM) Textpresso(secM) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Translation and secretion of SecM regulates downstream secA gene expression. First 37 aa are predicted signal peptide. The arrest sequence is 150-FXXXXWIXXXXGIRAGP-166. The arrested peptide ends with G165: P-166 encodes an arrest requirement for free Pro166-tRNA in the ribosomal peptidyl transferase A site (Muto 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.