dksA:Quickview: Difference between revisions
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[http://porteco.org/AjaxSearch.jsp?searchString=dksA&s=search PortEco search(dksA)] [http://ecoliwiki.net/tools/display_dna.php?gene=dksA&loc=MG1655:160604..160149,W3110:160604..160149,DH10B:134708..134253,REL606:163455..163000,BW2952:160148..160603 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=160148&end=160603&gene=dksA&aa=mqegqnrktsslsilaiagvepyqekpgeeymneaqlahfrrileawrnqlrdevdrtvthmqdeaanfpdpvdraaqeeefslelrnrdrerklikkiektlkkvededfgycescgveigirrlearptadlcidcktlaeirekqmag Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dksA+AND+escherichia+coli Pubmed(dksA)] [http:// | [http://porteco.org/AjaxSearch.jsp?searchString=dksA&s=search PortEco search(dksA)] [http://ecoliwiki.net/tools/display_dna.php?gene=dksA&loc=MG1655:160604..160149,W3110:160604..160149,DH10B:134708..134253,REL606:163455..163000,BW2952:160148..160603 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=160148&end=160603&gene=dksA&aa=mqegqnrktsslsilaiagvepyqekpgeeymneaqlahfrrileawrnqlrdevdrtvthmqdeaanfpdpvdraaqeeefslelrnrdrerklikkiektlkkvededfgycescgveigirrlearptadlcidcktlaeirekqmag Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dksA+AND+escherichia+coli Pubmed(dksA)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=dksA Textpresso(dksA)] | ||
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Revision as of 18:13, 27 June 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
dksA |
|---|---|
| Gene Synonym(s) |
ECK0144, b0145, JW0141, msmA[1] |
| Product Desc. |
RNAP-binding transcriptional regulator of rRNA transcription[2][3] RNAP-binding protein modulating ppGpp and iNTP regulation; reduces open complex half-life on rRNA promoters[4] |
| Product Synonyms(s) |
RNAP-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein[1], B0145[2][1], MsmA[2][1], DksA[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): |
| Regulation/Activity | |
| Quick Links |
PortEco search(dksA) DNA display Protein display Pubmed(dksA) Textpresso(dksA) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
High copy dksA suppresses mukB and TS growth and filamentation of a dnaK mutant. dksA is also a multicopy suppressor of dnaJ, grpE and prc. dksA transcription is alkali-inducible. Mutations affect chromosomal supercoiling. Binds TrxA (Kumar, 2004). HT_Cmplx24_Cyt: DksA+GreA. dksA and ybiI are paralogs.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.