der:Quickview: Difference between revisions

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[http://porteco.org/AjaxSearch.jsp?searchString=der&s=search PortEco search(der)]    [http://ecoliwiki.net/tools/display_dna.php?gene=der&loc=MG1655:2635378..2633906,W3110:2636012..2634540,DH10B:2727143..2725671,BW2952:2519711..2521183 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2519711&end=2521183&gene=der&aa=mrclmiyknealnmvpvvalvgrpnvgkstlfnrltrtrdalvadfpgltrdrkygraeiegreficidtggidgtedgvetrmaeqsllaieeadvvlfmvdaraglmpadeaiakhlrsrekptflvanktdgldpdqavvdfyslglgeiypiaashgrgvlsllehvllpwmedlapqeevdedaeywaqfeaeengeeeeeddfdpqslpiklaivgrpnvgkstltnrilgeervvvydmpgttrdsiyipmerdgreyvlidtagvrkrgkitdavekfsviktlqaiedanvvmlvidaregisdqdlsllgfilnsgrslvivvnkwdglsqevkeqvketldfrlgfidfarvhfisalhgsgvgnlfesvreaydsstrrvgtsmltrimtmavedhqpplvrgrrvklkyahaggynppivvihgnqvkdlpdsykrylmnyfrksldvmgspiriqfkegenpyankrntltptqmrkrkrlmkhikknk Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=der+AND+escherichia+coli Pubmed(der)]    [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=der Textpresso(der)]
[http://porteco.org/AjaxSearch.jsp?searchString=der&s=search PortEco search(der)]    [http://ecoliwiki.net/tools/display_dna.php?gene=der&loc=MG1655:2635378..2633906,W3110:2636012..2634540,DH10B:2727143..2725671,BW2952:2519711..2521183 DNA display]    [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2519711&end=2521183&gene=der&aa=mrclmiyknealnmvpvvalvgrpnvgkstlfnrltrtrdalvadfpgltrdrkygraeiegreficidtggidgtedgvetrmaeqsllaieeadvvlfmvdaraglmpadeaiakhlrsrekptflvanktdgldpdqavvdfyslglgeiypiaashgrgvlsllehvllpwmedlapqeevdedaeywaqfeaeengeeeeeddfdpqslpiklaivgrpnvgkstltnrilgeervvvydmpgttrdsiyipmerdgreyvlidtagvrkrgkitdavekfsviktlqaiedanvvmlvidaregisdqdlsllgfilnsgrslvivvnkwdglsqevkeqvketldfrlgfidfarvhfisalhgsgvgnlfesvreaydsstrrvgtsmltrimtmavedhqpplvrgrrvklkyahaggynppivvihgnqvkdlpdsykrylmnyfrksldvmgspiriqfkegenpyankrntltptqmrkrkrlmkhikknk Protein display]    [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=der+AND+escherichia+coli Pubmed(der)]    [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=der Textpresso(der)]


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Revision as of 18:13, 27 June 2011

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

der

Gene Synonym(s)

ECK2507, b2511, JW5403, engA, yfgK[1]

Product Desc.

50S ribosomal subunit stability factor[2][3]

Multicopy suppressor of ftsJ; depleted cells form filaments with defective chromosome segregation; GTPase[4]

Product Synonyms(s)

predicted GTP-binding protein[1], B2511[2][1], Der[2][1], YfgK[2][1], EngA[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yfgL-der[2]

Regulation/Activity
Quick Links

PortEco search(der)    DNA display    Protein display    Pubmed(der)    Textpresso(der)

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Der-depletion alters ribosome stability and/or biogenesis, as evidenced by polysome profiles (Bharat, 2006). Der has two tandem GTP-binding domains. der is an essential gene.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.