deaD:Quickview: Difference between revisions
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!align=left {{table_heading_style}} |Quick Links | !align=left {{table_heading_style}} |Quick Links | ||
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[http://porteco.org/AjaxSearch.jsp?searchString=deaD&s=search PortEco search(deaD)] [http://ecoliwiki.net/tools/display_dna.php?gene=deaD&loc=MG1655:3305882..3303993,W3110:3307715..3305826,DH10B:3403627..3401738,REL606:3243094..3241205,BW2952:3191141..3193030 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3191141&end=3193030&gene=deaD&aa=mmsyvdwpplilrhtyymaefettfadlglkapilealndlgyekpspiqaeciphllngrdvlgmaqtgsgktaafslpllqnldpelkapqilvlaptrelavqvaeamtdfskhmrgvnvvalyggqrydvqlralrqgpqivvgtpgrlldhlkrgtldlsklsglvldeademlrmgfiedvetimaqipeghqtalfsatmpeairritrrfmkepqevriqssvttrpdisqsywtvwgmrknealvrfleaedfdaaiifvrtknatlevaealerngynsaalngdmnqalreqtlerlkdgrldiliatdvaargldverislvvnydipmdsesyvhrigrtgragragrallfvenrerrllrniertmkltipevelpnaellgkrrlekfaakvqqqlessdldqyrallskiqptaegeeldletlaaallkmaqgertlivppdapmrpkrefrdrddrgprdrndrgprgdredrprrerrdvgdmqlyrievgrddgvevrhivgaianegdissryigniklfashstielpkgmpgevlqhftrtrilnkpmnmqllgdaqphtggerrgggrgfggerreggrnfsgerreggrgdgrrfsgerregraprrddstgrrrfggda Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=deaD+AND+escherichia+coli Pubmed(deaD)] [http:// | [http://porteco.org/AjaxSearch.jsp?searchString=deaD&s=search PortEco search(deaD)] [http://ecoliwiki.net/tools/display_dna.php?gene=deaD&loc=MG1655:3305882..3303993,W3110:3307715..3305826,DH10B:3403627..3401738,REL606:3243094..3241205,BW2952:3191141..3193030 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3191141&end=3193030&gene=deaD&aa=mmsyvdwpplilrhtyymaefettfadlglkapilealndlgyekpspiqaeciphllngrdvlgmaqtgsgktaafslpllqnldpelkapqilvlaptrelavqvaeamtdfskhmrgvnvvalyggqrydvqlralrqgpqivvgtpgrlldhlkrgtldlsklsglvldeademlrmgfiedvetimaqipeghqtalfsatmpeairritrrfmkepqevriqssvttrpdisqsywtvwgmrknealvrfleaedfdaaiifvrtknatlevaealerngynsaalngdmnqalreqtlerlkdgrldiliatdvaargldverislvvnydipmdsesyvhrigrtgragragrallfvenrerrllrniertmkltipevelpnaellgkrrlekfaakvqqqlessdldqyrallskiqptaegeeldletlaaallkmaqgertlivppdapmrpkrefrdrddrgprdrndrgprgdredrprrerrdvgdmqlyrievgrddgvevrhivgaianegdissryigniklfashstielpkgmpgevlqhftrtrilnkpmnmqllgdaqphtggerrgggrgfggerreggrnfsgerreggrgdgrrfsgerregraprrddstgrrrfggda Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=deaD+AND+escherichia+coli Pubmed(deaD)] [http://textpresso.tamu.edu/cgi-bin/textpresso/search?q=deaD Textpresso(deaD)] | ||
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Revision as of 18:13, 27 June 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
deaD |
|---|---|
| Gene Synonym(s) |
ECK3150, b3162, JW5531, mssB, rhlD[1] |
| Product Desc. |
CsdA, DEAD-box RNA helicase[2][3] Translation factor W2, putative RNA helix-destabilizer; facilitates translation of mRNAs with 5' secondary structures; multicopy suppressor of rpsB(Ts) mutations[4] |
| Product Synonyms(s) |
ATP-dependent RNA helicase[1], B3162[2][1], RhlD[2][1], MssB[2][1], DeaD[2][1] |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(deaD) DNA display Protein display Pubmed(deaD) Textpresso(deaD) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Mechanism of DeaD 50S biogenesis differs from that for SrmB 50S biogenesis. stabilizes exposed mRNA, possibly by protecting or destabilizing secondary structure of RNase E sites. Cold shock-inducible; acid-inducible.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.