uxaA:Quickview: Difference between revisions
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[http://ecoliwiki.net/tools/display_dna.php?gene=uxaA&loc=MG1655:3241336..3239849,W3110:3241970..3240483,REL606:3176348..3174861,DH10B:3339081..3337594,BW2952:3126997..3128484 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3126997&end=3128484&gene=uxaA&aa=mqyikihaldnvavaladlaegtevsvdnqtvtlrqdvarghkfaltdiakganvikyglpigyaladiaagvhvhahntrtnlsdldqyryqpdfqdlpaqaadrevqiyrrangdvgvrnelwilptvgcvngiarqiqnrflketnnaegtdgvflfshtygcsqlgddhintrtmlqnmvrhpnagavlviglgcennqvaafretlgdidpervhfmicqqqddeieagiehlhqlynvmrndkrepgklselkfglecggsdglsgitanpmlgrfsdyvianggttvltevpemfgaeqllmdhcrdeatfeklvtmvndfkqyfiahdqpiyenpspgnkaggittledkslgctqkagssvvvdvlrygerlktpglnllsapgndavatsalagagchmvlfstgrgtpyggfvptvkiatnselaakkkhwidfdagqlihgkampqlleefidtivefangkqtcnerndfrelaifksgvtl Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=uxaA+AND+escherichia+coli Pubmed(uxaA)] [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=uxaA Textpresso(uxaA)] | [http://porteco.org/AjaxSearch.jsp?searchString=uxaA&s=search PortEco search(uxaA)] [http://ecoliwiki.net/tools/display_dna.php?gene=uxaA&loc=MG1655:3241336..3239849,W3110:3241970..3240483,REL606:3176348..3174861,DH10B:3339081..3337594,BW2952:3126997..3128484 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3126997&end=3128484&gene=uxaA&aa=mqyikihaldnvavaladlaegtevsvdnqtvtlrqdvarghkfaltdiakganvikyglpigyaladiaagvhvhahntrtnlsdldqyryqpdfqdlpaqaadrevqiyrrangdvgvrnelwilptvgcvngiarqiqnrflketnnaegtdgvflfshtygcsqlgddhintrtmlqnmvrhpnagavlviglgcennqvaafretlgdidpervhfmicqqqddeieagiehlhqlynvmrndkrepgklselkfglecggsdglsgitanpmlgrfsdyvianggttvltevpemfgaeqllmdhcrdeatfeklvtmvndfkqyfiahdqpiyenpspgnkaggittledkslgctqkagssvvvdvlrygerlktpglnllsapgndavatsalagagchmvlfstgrgtpyggfvptvkiatnselaakkkhwidfdagqlihgkampqlleefidtivefangkqtcnerndfrelaifksgvtl Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=uxaA+AND+escherichia+coli Pubmed(uxaA)] [http://trimer.tamu.edu/cgi-bin/textpresso/search?q=uxaA Textpresso(uxaA)] | ||
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Revision as of 08:33, 27 May 2011
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
uxaA |
|---|---|
| Gene Synonym(s) |
ECK3082, b3091, JW3062, ygjW[1] |
| Product Desc. |
D-Altronate hydrolase (hydratase), Fe(2)-requiring; galacturonate branch of hexuronate pathway[2] |
| Product Synonyms(s) | |
| Function from GO |
<GO_nr /> |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links |
PortEco search(uxaA) DNA display Protein display Pubmed(uxaA) Textpresso(uxaA) |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
ExuR regulon. UxaA is paralogous to GarD and contains a conserved CxxS redox motif. The unprocessed tisB pre-mRNA functions as an antisense RNA regulator of uxaA, resulting in cleavage of uxaA mRNA at the antisense site and also reciprocal cleavage and activation of the tisB pre-mRNA (forming the +42 tisB RNA) (Weel-Sneve, 2008).[2]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7