Cis Element:attI: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
/Volumes/r3/t3/ul/working/touchTables/touch_all_tables.php
Line 8: Line 8:
*  
*  
****************************************************************************************** -->
****************************************************************************************** -->
{| id="F4989f2b57b392"  class=" tableEdit Cis_element_summary_table"   
{|   id="F4989f2b57b392"  class=" tableEdit Cis_element_summary_table"   


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
<i>attI</i>
<i>attI</i>
|-
|-
!align=left |Synonyms
!align=left {{table_heading_style}} |Synonyms
||
||


|-
|-
!align=left |Function
!align=left {{table_heading_style}} |Function
||
||
Integration site for P4-like cryptic prophage
Integration site for P4-like cryptic prophage
|-
|-
!align=left |Location
!align=left {{table_heading_style}} |Location
||
||
17.3 minutes in MG1655,   
17.3 minutes in MG1655,   
located just before attLambda (attLAM)
located just before attLambda (attLAM)
|-
|-
!align=left |SO terms
!align=left {{table_heading_style}} |SO terms
||
||


Line 48: Line 48:
****************************************************************************************** -->{{Gene_location_help}}
****************************************************************************************** -->{{Gene_location_help}}
{|  id="H4989f2b57d61b"  class=" tableEdit Gene_location_table"   
{|  id="H4989f2b57d61b"  class=" tableEdit Gene_location_table"   
|-
|- {{table_heading_style}}
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
!|Strain!!Map location!!Genome coordinates!!Genome browsers!!Sequence links
|-  
|-  
Line 78: Line 78:
*  
*  
****************************************************************************************** -->{{Product_interactions_help}}
****************************************************************************************** -->{{Product_interactions_help}}
{|  id="Z4989f2b57e97a"  class=" tableEdit Product_interactions_table"   
{|  id="Z4989f2b57e97a"  class=" tableEdit Product_interactions_table dataTable"   
|-
|- {{table heading style}}
!|Partner Type!!Partner!!Notes!!References!!Evidence
!|Partner Type!!Partner!!Notes!!References!!Evidence


Line 99: Line 99:
****************************************************************************************** -->
****************************************************************************************** -->
{|  id="A4989f2b57fc47"  class=" tableEdit Cis_Element_allele_table"   
{|  id="A4989f2b57fc47"  class=" tableEdit Cis_Element_allele_table"   
|-
|- {{table_heading_style}}
!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments
!|Allele!!Nt change(s)!!Phenotype: Type!!Phenotype: Description!!Reference!!Availability!!Comments


Line 119: Line 119:
****************************************************************************************** -->{{Gene_resources_help}}
****************************************************************************************** -->{{Gene_resources_help}}
{|  id="P4989f2b581002"  class=" tableEdit Gene_resource_table"   
{|  id="P4989f2b581002"  class=" tableEdit Gene_resource_table"   
|-
|- {{table_heading_style}}
!|Resource!!Resource Type!!Source!!Notes/Reference
!|Resource!!Resource Type!!Source!!Notes/Reference


Line 138: Line 138:
****************************************************************************************** -->{{Gene_accessions_help}}
****************************************************************************************** -->{{Gene_accessions_help}}
{|  id="Y4989f2b58224c"  class=" tableEdit Gene_accessions_table"   
{|  id="Y4989f2b58224c"  class=" tableEdit Gene_accessions_table"   
|-
|- {{table_heading_style}}
!|Database!!Accession!!Notes
!|Database!!Accession!!Notes
|-  
|-  

Revision as of 16:35, 17 June 2010

Cis element summary table

Standard Name

attI

Synonyms
Function

Integration site for P4-like cryptic prophage

Location

17.3 minutes in MG1655, located just before attLambda (attLAM)

SO terms


edit table

Notes

Location and Sequence

[back to top]


See Help:Gene_location for help entering information in the Gene Location and DNA sequence table.

Strain Map location Genome coordinates Genome browsers Sequence links

MG1655

17.3 minutes

MG1655: ..806565
gbrowse_img.php?coord=806551..806565&genome=ecoli&name=MG1655&trackset=DNA_unlabeled&width=300&.png

edit table


Notes

Interactions

[back to top]


See Help:Product_interactions for help entering or editing information about gene product interactions in this section of EcoliWiki.

Partner Type Partner Notes References Evidence
edit table


Notes

Mutant alleles and phenotypes

[back to top]


Allele Nt change(s) Phenotype: Type Phenotype: Description Reference Availability Comments
edit table


Notes

Genetic Resources

[back to top]


See Help:Gene_resources for help entering information into the Genetic Resources table.

Resource Resource Type Source Notes/Reference
edit table

Notes

Accessions

[back to top]


See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

PEC

attI


edit table


Notes

References

[back to top]


See Help:References for how to manage references in EcoliWiki.


Categories

Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=Cis_Element:attI&oldid=1103575"