nanE:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Function from GO
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
<GO_nr />
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
* GO:0047465 N-acylglucosamine-6-phosphate 2-epimerase activity ([http://www.geneontology.org/GO.evidence.shtml NAS])
'''Biological Process'''
* GO:0006053 N-acetylmannosamine catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
 
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left {{table_heading_style}} |Knock-Out Phenotype

Revision as of 19:33, 2 February 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

nanE

Gene Synonym(s)

ECK3212, b3223, JW3192, yhcJ[1]

Product Desc.

NANE[2][3]

ManNAc-6-P to GlcNAc-6-P epimerase[4]

Product Synonyms(s)

predicted N-acetylmannosamine-6-P epimerase[1], B3223[2][1], YhcJ[2][1], NanE[2][1]

Function from GO

<GO_nr />

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): nanATEK-yhcH[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(nanE)    Textpresso(nanE)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


NanE is not predicted to be a lipoprotein by LipOP or PATOSEQ, but is listed in DOLOP as a putative lipoprotein. Although the Cys is conserved, none of the homologs are predicted by LipoP to be a lipoprotein, so it is likely not to be a lipoprotein. NanE was just below the PATOSEQ cutoff for a lipoprotein prediction.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.