rpiR:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''rpiR''  
''rpiR''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''rpiR, ECK4082, b4089, JW4050, yjcY'', alsR<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''rpiR, ECK4082, b4089, JW4050, yjcY'', alsR<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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Txnl repressor for ''als'' operon and ''rpiB''<ref name='http:www.ecogene.org'/>
Txnl repressor for ''als'' operon and ''rpiB''<ref name='http:www.ecogene.org'/>


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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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AlsR product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B4089 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcY product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
AlsR product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B4089 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YjcY product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
* GO:0006350 transcription ([http://www.geneontology.org/GO.evidence.shtml IEP])
'''Molecular Function'''
* GO:0016564 transcription repressor activity ([http://www.geneontology.org/GO.evidence.shtml IEP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Expression
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!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=rpiR&loc=MG1655:4311014..4310124,W3110:4317669..4316779,DH10B:4411376..4410486,REL606:4291813..4290923 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4291813&end=4290923&gene=rpiR&aa=massiqgqenvmsqsefdsalpngiglapylrmkqegmtenesrivewllkpgnlscapaikdvaealavseamivkvskllgfsgfrnlrsaledyfsqseqvlpselafdeapqdvvnkvfnitlrtimegqsivnvdeihraarffyqarqrdlygaggsnaicadvqhkflrigvrcqaypdahimmmsasllqegdvvlvvthsgrtsdvkaavelakkngakiicithsyhspiakladyiicspapetpllgrnasarilqltlldaffvsvaqlnieqaninmqktgaivdffspgalk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpiR+AND+escherichia+coli Pubmed(rpiR)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rpiR Textpresso(rpiR)]


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Revision as of 00:46, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

rpiR

Gene Synonym(s)

rpiR, ECK4082, b4089, JW4050, yjcY, alsR[1][2]

Product Desc.

Txnl repressor for als operon and rpiB[3]

Product Synonyms(s)

AlsR product[2][1], B4089 product[2][1], YjcY product[2][1]

Function from GO

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression
Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(rpiR)    Textpresso(rpiR)

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ Cite error: Invalid <ref> tag; no text was provided for refs named http:www.ecogene.org