gatR:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''gatR'' | ''gatR'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
Note that this is a pseudogene in K12 strains. | Note that this is a pseudogene in K12 strains. | ||
| Line 37: | Line 37: | ||
''gatR, ECK2083, b2087, JW5340, b2090, JW2074, b4498, JW5340+JW2074, gatR_1'', gatR_2<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/> | ''gatR, ECK2083, b2087, JW5340, b2090, JW2074, b4498, JW5340+JW2074, gatR_1'', gatR_2<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc11.1'/><ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
Note that this is a pseudogene in K12 strains. | Note that this is a pseudogene in K12 strains. | ||
| Line 46: | Line 46: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
B2087<ref name='LIB:EcoCyc10.6'/>, GatR_1<ref name='LIB:EcoCyc10.6'/>, GatR<ref name='LIB:EcoCyc10.6'/>, split galactitol utilization operon repressor, fragment 1<ref name='LIB:EcoCyc10.6'/>, B2090<ref name='LIB:EcoCyc10.6'/>, split galactitol utilization operon repressor, fragment 2<ref name='LIB:EcoCyc10.6'/> | B2087<ref name='LIB:EcoCyc10.6'/>, GatR_1<ref name='LIB:EcoCyc10.6'/>, GatR<ref name='LIB:EcoCyc10.6'/>, split galactitol utilization operon repressor, fragment 1<ref name='LIB:EcoCyc10.6'/>, B2090<ref name='LIB:EcoCyc10.6'/>, split galactitol utilization operon repressor, fragment 2<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:gatR_1|gatR_1]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:gatR_1|gatR_1]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=2&loc=MG1655:2168163..2167717,W3110:2172276..2171830,MG1655:2169757..2169419,W3110:2173870..2173532,MG1655:2169757..2167717,W3110:2173870..2171830 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2173870&end=2171830&gene=2&aa= Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=2+AND+gatR Pubmed(2)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=2 Textpresso(2)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 00:29, 22 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
gatR |
|---|---|
| Gene Synonym(s) |
Note that this is a pseudogene in K12 strains. gatR, ECK2083, b2087, JW5340, b2090, JW2074, b4498, JW5340+JW2074, gatR_1, gatR_2[1][2][3] |
| Product Desc. |
Note that this is a pseudogene in K12 strains. negative DNA-binding transcriptional regulator of galactitol metabolism[3][2]; GatR_2[3][2]; Component of GatR transcriptional repressor[3][2] |
| Product Synonyms(s) |
B2087[3], GatR_1[3], GatR[3], split galactitol utilization operon repressor, fragment 1[3], B2090[3], split galactitol utilization operon repressor, fragment 2[3] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
This is a pseudogene in K12 strains.
References
- ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7