rimM:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''rimM'' | ''rimM'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK2605, b2608, JW5413, yfjA''<ref name='LIB:Riley_2006'/> | ''ECK2605, b2608, JW5413, yfjA''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
ribosome maturation protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ribosome maturation protein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
| Line 41: | Line 41: | ||
Factor required for 16S RNA processing; 30S maturation; binds S19<ref name='LIB:EcoGene'/> | Factor required for 16S RNA processing; 30S maturation; binds S19<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
16S rRNA processing protein<ref name='LIB:Riley_2006'/>, B2608<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfjA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RimM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, 21K<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 16S rRNA processing protein<ref name='LIB:Riley_2006'/>, B2608<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfjA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RimM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, 21K<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
'''Biological Process''' | |||
* GO:0030490 maturation of SSU-rRNA ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:rpsP-rimM-trmD-rplS|rpsP-rimM-trmD-rplS]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rpsP-rimM-trmD-rplS|rpsP-rimM-trmD-rplS]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=rimM&loc=MG1655:2743940..2743392,W3110:2744574..2744026,DH10B:2835705..2835157,REL606:2667325..2666777 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2667325&end=2666777&gene=rimM&aa=mvmmskqltaqapvdpivlgkmgssygirgwlrvfsstedaesifdyqpwfiqkagqwqqvqleswkhhnqdmiiklkgvddrdaanlltnceivvdssqlpqleegdyywkdlmgcqvvttegydlgkvvdmmetgsndvlvikanlkdafgikerlvpfldgqvikkvdlttrsievdwdpgf Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rimM+AND+escherichia+coli Pubmed(rimM)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rimM Textpresso(rimM)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 00:28, 22 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rimM |
|---|---|
| Gene Synonym(s) |
ECK2605, b2608, JW5413, yfjA[1] |
| Product Desc. |
ribosome maturation protein[2][3] Factor required for 16S RNA processing; 30S maturation; binds S19[4] |
| Product Synonyms(s) |
16S rRNA processing protein[1], B2608[2][1], YfjA[2][1], RimM[2][1], 21K[2][1] |
| Function from GO |
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): rpsP-rimM-trmD-rplS[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
other PDB (T. thermophilus): 2DOG. otherPDB (P. aeruginosa): 2F1L.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.