apbE:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''apbE'' | ''apbE'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''yojL, ECK2206, b2214, JW5368, yojK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''yojL, ECK2206, b2214, JW5368, yojK''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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predicted thiamine biosynthesis lipoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | predicted thiamine biosynthesis lipoprotein<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Lipoprotein involved in thiamine synthesis; primarily characterized in Salmonella<ref name='LIB:EcoGene'/> | Lipoprotein involved in thiamine synthesis; primarily characterized in Salmonella<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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predicted thiamine biosynthesis lipoprotein<ref name='LIB:Riley_2006'/>, B2214<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ApbE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | predicted thiamine biosynthesis lipoprotein<ref name='LIB:Riley_2006'/>, B2214<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojK<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YojL<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, ApbE<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:yojL|yojL]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:yojL|yojL]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=apbE&loc=MG1655:2309556..2308501,W3110:2314868..2313813 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2314868&end=2313813&gene=apbE&aa=meisftrvallaaalffvgcdqkpqpakthatevtvlegktmgtfwrasipgidakrsaelkekiqtqldaddqllstykkdsalmrfndsqslspwpvseamadivttslrigaktdgamditvgplvnlwgfgpeqqpvqipsqeqidamkaktglqhltvinqshqqylqkdlpdlyvdlstvgegyaadhlarlmeqegisrylvsvggalnsrgmngeglpwrvaiqkptdkenavqavvdinghgistsgsyrnyyeldgkrlshvidpqtgrpiehnlvsvtviaptaleadawdtglmvlgpekakevvrreglavymitkegdsfktwmspqfksflvsekn Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=apbE+AND+escherichia+coli Pubmed(apbE)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=apbE Textpresso(apbE)] | |||
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Revision as of 00:12, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
apbE |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
predicted thiamine biosynthesis lipoprotein[2][3] Lipoprotein involved in thiamine synthesis; primarily characterized in Salmonella[4] |
| Product Synonyms(s) |
predicted thiamine biosynthesis lipoprotein[1], B2214[2][1], YojK[2][1], YojL[2][1], ApbE[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
ApbE probably helps convert aminoimidazole ribotide AIR, a purine intermediate, to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine HMP moiety of thiamine. Localized to the inner membrane, periplasmic location, but not membrane anchor, is required for function. First 19 aa are a type II signal peptide.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.