asnB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''asnB''  
''asnB''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0662, b0674, JW0660''<ref name='LIB:Riley_2006'/>
''ECK0662, b0674, JW0660''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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AsnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
AsnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Asparagine synthase B [glutamine-hydrolyzing]<ref name='LIB:EcoGene'/>
Asparagine synthase B [glutamine-hydrolyzing]<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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asparagine synthetase B<ref name='LIB:Riley_2006'/>, B0674<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AsnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
asparagine synthetase B<ref name='LIB:Riley_2006'/>, B0674<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, AsnB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Biological Process'''
* GO:0006529 asparagine biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0008652 amino acid biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0009063 amino acid catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0006541 glutamine metabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Cellular Component'''
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0005524 ATP binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0016597 amino acid binding ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:asnB|asnB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:asnB|asnB]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=asnB&loc=MG1655:698400..696736,W3110:699599..697935,DH10B:750992..749328,REL606:681272..679608 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=681272&end=679608&gene=asnB&aa=mcsifgvfdiktdavelrkkalelsrlmrhrgpdwsgiyasdnailaherlsivdvnagaqplynqqkthvlavngeiynhqalraeygdryqfqtgsdcevilalyqekgpeflddlqgmfafalydsekdayligrdhlgiiplymgydehgqlyvasemkalvpvcrtikefpagsylwsqdgeirsyyhrdwfdydavkdnvtdknelrqaledsvkshlmsdvpygvllsggldssiisaitkkyaarrvedqerseawwpqlhsfavglpgspdlkaaqevanhlgtvhheihftvqegldairdviyhietydvttirastpmylmsrkikamgikmvlsgegsdevfggylyfhkapnakelheetvrkllalhmydcarankamsawgvearvpfldkkfldvamrinpqdkmcgngkmekhilrecfeaylpasvawrqkeqfsdgvgyswidtlkevaaqqvsdqqletarfrfpyntptskeaylyreifeelfplpsaaecvpggpsvacssakaiewdeafkkmddpsgravgvhqsayk Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=asnB+AND+escherichia+coli Pubmed(asnB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=asnB Textpresso(asnB)]


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Revision as of 00:10, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

asnB

Gene Synonym(s)

ECK0662, b0674, JW0660[1]

Product Desc.

AsnB[2][3];

Component of asparagine synthetase B[2][3]

Asparagine synthase B [glutamine-hydrolyzing][4]

Product Synonyms(s)

asparagine synthetase B[1], B0674[2][1], AsnB[2][1]

Function from GO

Biological Process

Cellular Component

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): asnB[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(asnB)    Textpresso(asnB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


AsnA and AsnB are redundant; an asparagine auxotrophy requires that both genes be mutated. Although ammonia can be utilized, glutamine is the preferred substrate.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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