barA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''barA''  
''barA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2780, b2786, JW2757, airS(S.t.)''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
''ECK2780, b2786, JW2757, airS(S.t.)''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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hybrid sensory histidine kinase, in two-component regulatory system with UvrY<ref name='LIB:Riley_2006'/>
hybrid sensory histidine kinase, in two-component regulatory system with UvrY<ref name='LIB:Riley_2006'/>
Sensor histidine protein kinase, pleiotropic; controls the expresion of csrB/C sRNAs; works in concert with UvrY response regulator<ref name='LIB:EcoGene'/>
Sensor histidine protein kinase, pleiotropic; controls the expresion of csrB/C sRNAs; works in concert with UvrY response regulator<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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B2786<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
B2786<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0009927 histidine phosphotransfer kinase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:barA|barA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:barA|barA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=barA&loc=MG1655:2913079..2915835,W3110:2913713..2916469,REL606:2803985..2806741,DH10B:3006957..3009713 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3006957&end=3009713&gene=barA&aa=mtnyslrarmmililaptvliglllsiffvvhryndlqrqledagasiieplavsteygmslqnresigqlisvlhrrhsdivraisvydennrlfvtsnfhldpssmqlgsnvpfprqltvtrdgdimilrtpiisesyspdespssdaknsqnmlgyialeldlksvrlqqykeifissvmmlfcigialifgwrlmrdvtgpirnmvntvdrirrgqldsrvegfmlgeldmlknginsmamslaayheemqhnidqatsdlretleqmeiqnveldlakkraqeaarikseflanmshelrtplngvigftrltlkteltptqrdhlntiersannllaiindvldfskleagklilesipfplrstldevvtllahsshdkgleltlniksdvpdnvigdplrlqqiitnlvgnaikftengnidilvekralsntkvqievqirdtgigiperdqsrlfqafrqadasisrrhggtglglvitqklvnemggdisfhsqpnrgstfwfhinldlnpniiiegpstqclagkrlayvepnsaaaqctldilsetplevvysptfsalppahydmmllgiavtfrepltmqherlakavsmtdflmlalpchaqvnaeklkqdgigacllkpltptrllpaltefchhkqntllpvtdesklamtvmavddnpanlkligalledmvqhvelcdsghqaverakqmpfdlilmdiqmpdmdgiracelihqlphqqqtpviavtahamagqkekllgagmsdylakpieeerlhnlllrykpgsgissrvvtpevneivvnpnatldwqlalrqaagktdlardmlqmlldflpevrnkveeqlvgenpeglvdlihklhgscgysgvprmknlcqlieqqlrsgtkeedlepellelldemdnvareaskilg Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=barA+AND+escherichia+coli Pubmed(barA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=barA Textpresso(barA)]


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Revision as of 00:09, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

barA

Gene Synonym(s)

ECK2780, b2786, JW2757, airS(S.t.)[1][2]

Product Desc.

hybrid sensory histidine kinase, in two-component regulatory system with UvrY[1] Sensor histidine protein kinase, pleiotropic; controls the expresion of csrB/C sRNAs; works in concert with UvrY response regulator[3]

Product Synonyms(s)

B2786[2][1]

Function from GO

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): barA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(barA)    Textpresso(barA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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BarA has both sensory kinase and response regulator domains. BarA is required for catalase (KatE) expression and resistance to hydrogen peroxide, through rpoS regulation.[3]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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