basS:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''basS'' | ''basS'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK4105, b4112, JW4073, pmrB''<ref name='LIB:Riley_2006'/> | ''ECK4105, b4112, JW4073, pmrB''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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sensory histidine kinase in two-component regulatory system with BasR product<ref name='LIB:Riley_2006'/> | sensory histidine kinase in two-component regulatory system with BasR product<ref name='LIB:Riley_2006'/> | ||
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Histidine protein kinase sensor Lipid A modification genes; two-component system involved in polymyxin resistance that senses high extracellular Fe(2+)<ref name='LIB:EcoGene'/> | Histidine protein kinase sensor Lipid A modification genes; two-component system involved in polymyxin resistance that senses high extracellular Fe(2+)<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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B4112<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PmrB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | B4112<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PmrB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:basRS|basRS]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:basRS|basRS]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=basS&loc=MG1655:4331295..4330204,W3110:4337950..4336859,REL606:4311986..4310895,DH10B:4431657..4430566 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4431657&end=4430566&gene=basS&aa=mhflrrpislrqrliltigaillvfelisvfwlwhesteqiqlfeqalrdnrnndrhimreireavaslivpgvfmvsltlficyqavrritrplaelqkeleartadnltpiaihsatleieavvsalndlvsrltstldnerlftadvahelrtplagvrlhlellakthhidvaplvarldqmmesvsqllqlaragqsfssgnyqhvklledvilpsydelstmldqrqqtlllpesaaditvqgdatllrmllrnlvenahryspqgsnimiklqeddgavmavedegpgideskcgelskafvrmdsryggiglglsivsritqlhhgqfflqnrqetsgtrawvrlkkdqyvanqi Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=basS+AND+escherichia+coli Pubmed(basS)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=basS Textpresso(basS)] | |||
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Revision as of 00:09, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
basS |
|---|---|
| Gene Synonym(s) |
ECK4105, b4112, JW4073, pmrB[1] |
| Product Desc. |
sensory histidine kinase in two-component regulatory system with BasR product[1] Histidine protein kinase sensor Lipid A modification genes; two-component system involved in polymyxin resistance that senses high extracellular Fe(2+)[2] |
| Product Synonyms(s) | |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
BasR is the cognate response regulator of the BasSR two-component system. The BasSR regulon has been primarily characterized in Salmonella; unlike E. coli, Salmonella also activates PmrAB(BasSR) in low Mg(2+), mediated by PhoPQ and the PmrD protein.[2]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7