btuB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''btuB'' | ''btuB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3958, b3966, JW3938, bfe, cer, G276''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK3958, b3966, JW3938, bfe, cer, G276''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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B12 uptake, outer membrane receptor; receptor for E colicins, phages BF23 and C1<ref name='LIB:EcoGene'/> | B12 uptake, outer membrane receptor; receptor for E colicins, phages BF23 and C1<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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vitamin B12/cobalamin outer membrane transporter<ref name='LIB:Riley_2006'/>, B3966<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Bfe<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BtuB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | vitamin B12/cobalamin outer membrane transporter<ref name='LIB:Riley_2006'/>, B3966<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cer<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Bfe<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, BtuB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
'''Biological Process''' | |||
* GO:0015889 cobalamin transport ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:btuB|btuB]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:btuB|btuB]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=btuB&loc=MG1655:4161662..4163506,W3110:3473042..3471198,REL606:4143500..4145344,DH10B:4261359..4263203 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4261359&end=4263203&gene=btuB&aa=mikkaslltacsvtafsawaqdtspdtlvvtanrfeqprstvlapttvvtrqdidrwqstsvndvlrrlpgvditqnggsgqlssifirgtnashvlvlidgvrlnlagvsgsadlsqfpialvqrveyirgprsavygsdaiggvvniittrdepgteisagwgsnsyqnydvstqqqlgdktrvtllgdyahthgydvvaygntgtqaqtdndgflsktlygalehnftdawsgfvrgygydnrtnydayyspgsplldtrklysqswdaglryngeliksqlitsyshskdynydphygrydssatldemkqytvqwannvivghgsigagvdwqkqtttpgtgyvedgydqrntgiyltglqqvgdftfegaarsddnsqfgrhgtwqtsagwefiegyrfiasygtsykapnlgqlygfygnpnldpekskqwegafegltagvnwrisgyrndvsdlidyddhtlkyynegkarikgveatanfdtgplthtvsydyvdarnaitdtpllrrakqqvkyqldwqlydfdwgityqylgtrydkdyssypyqtvkmggvslwdlavaypvtshltvrgkianlfdkdyetvygyqtagreytlsgsytf Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=btuB+AND+escherichia+coli Pubmed(btuB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=btuB Textpresso(btuB)] | |||
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Revision as of 00:08, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
btuB |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23[2][3] B12 uptake, outer membrane receptor; receptor for E colicins, phages BF23 and C1[4] |
| Product Synonyms(s) |
vitamin B12/cobalamin outer membrane transporter[1], B3966[2][1], Cer[2][1], Bfe[2][1], BtuB[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
BtuB translation is regulated by adenosylcobalamin binding directly to btuB mRNA, a B12-responsive riboswitch.[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.