carA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''carA''  
''carA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK0033, b0032, JW0030, arg+ura, cap, pyrA, arg''<ref name='LIB:Riley_2006'/>
''ECK0033, b0032, JW0030, arg+ura, cap, pyrA, arg''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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CarA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
CarA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Carbamoyl phosphate synthase, small subunit; glutamine-hydrolyzing, tetramer of heterodimers<ref name='LIB:EcoGene'/>
Carbamoyl phosphate synthase, small subunit; glutamine-hydrolyzing, tetramer of heterodimers<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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carbamoyl phosphate synthetase small subunit, glutamine amidotransferase<ref name='LIB:Riley_2006'/>, B0032<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Arg<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cap<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PyrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, &alpha; chain<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, small chain<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CarA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
carbamoyl phosphate synthetase small subunit, glutamine amidotransferase<ref name='LIB:Riley_2006'/>, B0032<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Arg<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Cap<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PyrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, &alpha; chain<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, small chain<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CarA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI,IMP])
* GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity ([http://www.geneontology.org/GO.evidence.shtml IMP])
'''Cellular Component'''
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006541 glutamine metabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0006526 arginine biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP])
* GO:0006207 'de novo' pyrimidine base biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:carAB|carAB]]<ref name='LIB:EcoCyc10.6'/>, OP00150, pyrA  
transcription unit(s): [[:Category:Txn_unit:carAB|carAB]]<ref name='LIB:EcoCyc10.6'/>, OP00150, pyrA  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=carA&loc=MG1655:29651..30799,W3110:29651..30799,DH10B:29651..30799,REL606:33722..34870 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=33722&end=34870&gene=carA&aa=miksallvledgtqfhgraigatgsavgevvfntsmtgyqeiltdpsysrqivtltyphignvgtndadeessqvhaqglvirdlpliasnfrntedlssylkrhnivaiadidtrkltrllrekgaqngciiagdnpdaalalekarafpglngmdlakevttaeayswtqgswtltgglpeakkedelpfhvvaydfgakrnilrmlvdrgcrltivpaqtsaedvlkmnpdgiflsngpgdpapcdyaitaiqkfletdipvfgiclghqllalasgaktvkmkfghhggnhpvkdveknvvmitaqnhgfavdeatlpanlrvthkslfdgtlqgihrtdkpafsfqghpeaspgphdaaplfdhfielieqyrktak Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=carA+AND+escherichia+coli Pubmed(carA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=carA Textpresso(carA)]


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Revision as of 00:08, 22 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

carA

Gene Synonym(s)

ECK0033, b0032, JW0030, arg+ura, cap, pyrA, arg[1]

Product Desc.

CarA[2][3];

Component of carbamoyl phosphate synthetase[2][3]

Carbamoyl phosphate synthase, small subunit; glutamine-hydrolyzing, tetramer of heterodimers[4]

Product Synonyms(s)

carbamoyl phosphate synthetase small subunit, glutamine amidotransferase[1], B0032[2][1], Arg[2][1], Cap[2][1], PyrA[2][1], α chain[2][1], small chain[2][1], CarA[2][1]

Function from GO

Molecular Function

Cellular Component

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): carAB[2], OP00150, pyrA

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(carA)    Textpresso(carA)

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See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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