dxr:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''dxr'' | ''dxr'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0172, b0173, JW0168, ispC, yaeM''<ref name='LIB:Riley_2006'/> | ''ECK0172, b0173, JW0168, ispC, yaeM''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Dxr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | Dxr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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1-deoxy-D-xylulose 5-phosphate (DXP) reductoisomerase, NAPDH-dependent; also called 2-C-methyl-D-erythritol 4-phosphate (MEP) synthase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; dimeric<ref name='LIB:EcoGene'/> | 1-deoxy-D-xylulose 5-phosphate (DXP) reductoisomerase, NAPDH-dependent; also called 2-C-methyl-D-erythritol 4-phosphate (MEP) synthase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; dimeric<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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1-deoxy-D-xylulose 5-phosphate reductoisomerase<ref name='LIB:Riley_2006'/>, B0173<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dxr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 1-deoxy-D-xylulose 5-phosphate reductoisomerase<ref name='LIB:Riley_2006'/>, B0173<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Dxr<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, IspC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0006744 ubiquinone biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Molecular Function''' | |||
* GO:0030604 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:dxr|dxr]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:dxr|dxr]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=dxr&loc=MG1655:193521..194717,W3110:193521..194717,DH10B:167625..168821 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=167625&end=168821&gene=dxr&aa=mkqltilgstgsigcstldvvrhnpehfrvvalvagknvtrmveqclefspryavmddeasakllktmlqqqgsrtevlsgqqaacdmaaledvdqvmaaivgaagllptlaairagktillankeslvtcgrlfmdavkqskaqllpvdsehnaifqslpqpiqhnlgyadleqngvvsilltgsggpfretplrdlatmtpdqacrhpnwsmgrkisvdsatmmnkgleyiearwlfnasasqmevlihpqsvihsmvryqdgsvlaqlgepdmrtpiahtmawpnrvnsgvkpldfcklsaltfaapdydrypclklameafeqgqaattalnaaneitvaaflaqqirftdiaalnlsvlekmdmrepqcvddvlsvdanarevarkevmrlas Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=dxr+AND+escherichia+coli Pubmed(dxr)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=dxr Textpresso(dxr)] | |||
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Revision as of 00:02, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
dxr |
|---|---|
| Gene Synonym(s) |
ECK0172, b0173, JW0168, ispC, yaeM[1] |
| Product Desc. |
Component of DXP reductoisomerase[2]; 1-deoxy-D-xylulose 5-phosphate reductoisomerase[3] 1-deoxy-D-xylulose 5-phosphate (DXP) reductoisomerase, NAPDH-dependent; also called 2-C-methyl-D-erythritol 4-phosphate (MEP) synthase; alternative nonmevalonate (DXP) pathway for terpenoid biosynthesis; dimeric[4] |
| Product Synonyms(s) |
1-deoxy-D-xylulose 5-phosphate reductoisomerase[1], B0173[2][1], Dxr[2][1], YaeM[2][1], IspC[2][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.