idi:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''idi'' | ''idi'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2884, b2889, JW2857, ygfV''<ref name='LIB:Riley_2006'/> | ''ECK2884, b2889, JW2857, ygfV''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Isopentenyl diphosphate isomerase, isoprenoid biosynthesis; interconverts isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)<ref name='LIB:EcoGene'/> | Isopentenyl diphosphate isomerase, isoprenoid biosynthesis; interconverts isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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isopentenyl diphosphate isomerase<ref name='LIB:Riley_2006'/>, B2889<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgfV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Idi<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | isopentenyl diphosphate isomerase<ref name='LIB:Riley_2006'/>, B2889<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgfV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Idi<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0006744 ubiquinone biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Molecular Function''' | |||
* GO:0004452 isopentenyl-diphosphate delta-isomerase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:idi|idi]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:idi|idi]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=idi&loc=MG1655:3031087..3031635,W3110:3031721..3032269,DH10B:3124957..3125505,REL606:2918819..2919367 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2918819&end=2919367&gene=idi&aa=mqtehvillnaqgvptgtlekyaahtadtrlhlafsswlfnakgqllvtrralskkawpgvwtnsvcghpqlgesnedavirrcryelgveitppesiypdfryratdpsgivenevcpvfaarttsalqinddevmdyqwcdladvlhgidatpwafspwmvmqatnrearkrlsaftqlk Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=idi+AND+escherichia+coli Pubmed(idi)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=idi Textpresso(idi)] | |||
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Revision as of 23:50, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
idi |
|---|---|
| Gene Synonym(s) |
ECK2884, b2889, JW2857, ygfV[1] |
| Product Desc. |
Isopentenyl diphosphate isomerase, isoprenoid biosynthesis; interconverts isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)[2] |
| Product Synonyms(s) |
isopentenyl diphosphate isomerase[1], B2889[3][1], YgfV[3][1], Idi[3][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
The idi gene is nonessential.[2]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7