idi:Evolution

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Homologs Families Links References Suggestions

Homologs in Other Organisms

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See Help:Evolution_homologs for help entering or editing information in this section of EcoliWiki.

Organism Homologs (Statistics) Comments

Anopheles gambiae

  • ENSANGP00000011643 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Arabidopsis thaliana

  • AT5G16440 (score: 1.000; bootstrap: 68%)
  • AT3G02780 (score: 0.795)

From Inparanoid:20070104

Bos taurus

  • ENSBTAP00000005323 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis briggsae

  • WBGene00041409 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Caenorhabditis elegans

  • WBGene00019460 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Ciona intestinalis

  • ENSCINP00000004427 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Danio rerio

  • ZDB-GENE-050913-44 (score: 1.000; bootstrap: 100%)
  • ZDB-CDNA-050612-98 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Dictyostelium discoideum

  • DDB0191342 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila melanogaster

  • FBgn0038876 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Drosophila pseudoobscura

  • GA19228-PA (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Gallus gallus

  • ENSGALP00000010861 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Homo sapiens

  • ENSP00000263151 (score: 1.000; bootstrap: 100%)
  • ENSP00000277517 (score: 0.485)

From Inparanoid:20070104

Macaca mulatta

  • ENSMMUP00000022523 (score: 1.000; bootstrap: 100%)
  • ENSMMUP00000014177 (score: 0.250)

From Inparanoid:20070104

Monodelphis domestica

  • ENSMODP00000007423 (score: 1.000; bootstrap: 100%)
  • ENSMODP00000011416 (score: 0.867)
  • ENSMODP00000007397 (score: 0.607)
  • ENSMODP00000007408 (score: 0.581)

From Inparanoid:20070104

Mus musculus

  • MGI:2442264 (score: 1.000; bootstrap: 100%)
  • MGI:2444315 (score: 0.537)

From Inparanoid:20070104

Oryza gramene

  • Q71RX2 (score: 1.000; bootstrap: 100%)
  • Q9M6K4 (score: 0.939)
  • Q8GVZ0 (score: 0.939)
  • Q6AUB0 (score: 0.839)

From Inparanoid:20070104

Pan troglodytes

  • ENSPTRP00000003784 (score: 1.000; bootstrap: 100%)
  • ENSPTRP00000003781 (score: 0.485)

From Inparanoid:20070104

Rattus norvegicus

  • ENSRNOP00000022389 (score: 1.000; bootstrap: 100%)
  • ENSRNOP00000033936 (score: 0.548)
  • ENSRNOP00000047707 (score: 0.545)
  • ENSRNOP00000048056 (score: 0.543)
  • ENSRNOP00000047209 (score: 0.541)
  • ENSRNOP00000049372 (score: 0.531)
  • ENSRNOP00000045142 (score: 0.474)
  • ENSRNOP00000036656 (score: 0.411)

From Inparanoid:20070104

Saccharomyces cerevisiae

  • YPL117C (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Schizosaccharomyces pombe

  • SPBC1065 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Takifugu rubripes

  • NEWSINFRUP00000143706 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Tetraodon nigroviridis

  • GSTENP00016624001 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Xenopus tropicalis

  • ENSXETP00000039244 (score: 1.000; bootstrap: 100%)

From Inparanoid:20070104

Shigella flexneri

S3074

From SHIGELLACYC

E. coli O157

Z4227

From ECOO157CYC


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Notes

Families

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See Help:Gene_accessions for help with entering information into the Gene Accessions table.

Database Accession Notes

Pfam (EcoliWiki Page)

PF00293 NUDIX domain

Panther (EcoliWiki Page)

PTHR10885:SF0

Superfamily (EcoliWiki Page)

SUPERFAMILY:55811

EcoCyc

EcoCyc:G7508

Escherichia coli str. K-12 substr. MG1655

EcoGene

EcoGene:EG13072

Escherichia coli str. K-12 substr. MG1655

RegulonDB

RegulonDB:ECK120004070

Escherichia coli str. K-12 substr. MG1655

EchoBASE

EchoBASE:EB2883

Escherichia coli str. K-12 substr. MG1655

ASAP

ASAP:ABE-0009484

Escherichia coli str. K-12 substr. MG1655

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Notes

Links

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References

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See Help:References for how to manage references in EcoliWiki.


Categories

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