kdsB:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''kdsB'' | ''kdsB'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0909, b0918, JW0901''<ref name='LIB:Riley_2006'/> | ''ECK0909, b0918, JW0901''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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CPM- | CPM- | ||
3-deoxy-manno-octulosonate cytidylyltransferase; LPS biosynthesis<ref name='LIB:EcoGene'/> | 3-deoxy-manno-octulosonate cytidylyltransferase; LPS biosynthesis<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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3-deoxy-manno-octulosonate cytidylyltransferase<ref name='LIB:Riley_2006'/>, B0918<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, KdsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 3-deoxy-manno-octulosonate cytidylyltransferase<ref name='LIB:Riley_2006'/>, B0918<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, KdsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0008690 3-deoxy-manno-octulosonate cytidylyltransferase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:ycaR|ycaR]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:ycaR|ycaR]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=kdsB&loc=MG1655:970075..970821,W3110:971274..972020,DH10B:1024003..1024749,REL606:987944..988690 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=987944&end=988690&gene=kdsB&aa=msfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaraveaaggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqvgmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflrhlgiygyragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedlervraemr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=kdsB+AND+escherichia+coli Pubmed(kdsB)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=kdsB Textpresso(kdsB)] | |||
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Revision as of 23:48, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
kdsB |
|---|---|
| Gene Synonym(s) |
ECK0909, b0918, JW0901[1] |
| Product Desc. |
CPM- 3-deoxy-manno-octulosonate cytidylyltransferase; LPS biosynthesis[2] |
| Product Synonyms(s) |
3-deoxy-manno-octulosonate cytidylyltransferase[1], B0918[3][1], KdsB[3][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Also known as CMP-KDO synthase(CKS). E. coli K-12 only has the L-CKS isozyme involved in LPS biosynthesis. The K-CKS isozyme KpsU is specific for K5 group II capsule biosynthesis , is 45% identical to KdsB, and has been characterized from E. coli K5 isolate #2980 (Genbank:X74567, UniProt:P42216; PDB:1H7E).[2]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7