lrp:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''lrp'' | ''lrp'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0880, b0889, JW0872, ihb, livR, lrs, lss, lstR, mbf, oppI, rblA, g''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK0880, b0889, JW0872, ihb, livR, lrs, lss, lstR, mbf, oppI, rblA, g''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Lrp transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | Lrp transcriptional dual regulator<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Global regulatory protein, Leu responsive; regulator of high-affinity branched-chain amino acid transport system; octameric or hexadecameric functional state<ref name='LIB:EcoGene'/> | Global regulatory protein, Leu responsive; regulator of high-affinity branched-chain amino acid transport system; octameric or hexadecameric functional state<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA-binding transcriptional dual regulator, leucine-binding<ref name='LIB:Riley_2006'/>, B0889<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LstR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Mbf<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OppI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RblA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lss<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lrs<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ihb<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lrp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LivR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system.<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA-binding transcriptional dual regulator, leucine-binding<ref name='LIB:Riley_2006'/>, B0889<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LstR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Mbf<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OppI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RblA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lss<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lrs<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Ihb<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Lrp<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, LivR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system.<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:lrp|lrp]]<ref name='LIB:EcoCyc10.6'/>, OP00251 | transcription unit(s): [[:Category:Txn_unit:lrp|lrp]]<ref name='LIB:EcoCyc10.6'/>, OP00251 | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=lrp&loc=MG1655:931818..932312,W3110:933017..933511,DH10B:985746..986240,REL606:949653..950147 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=949653&end=950147&gene=lrp&aa=mvdskkrpgkdldridrnilnelqkdgrisnvelskrvglsptpclervrrlerqgfiqgytallnphyldasllvfveitlnrgapdvfeqfntavqkleeiqechlvsgdfdyllktrvpdmsayrkllgetllrlpgvndtrtyvvmeevkqsnrlviktr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=lrp+AND+escherichia+coli Pubmed(lrp)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=lrp Textpresso(lrp)] | |||
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Revision as of 23:46, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
lrp |
|---|---|
| Gene Synonym(s) |
ECK0880, b0889, JW0872, ihb, livR, lrs, lss, lstR, mbf, oppI, rblA, g[1][2] |
| Product Desc. |
Lrp transcriptional dual regulator[2][3] Global regulatory protein, Leu responsive; regulator of high-affinity branched-chain amino acid transport system; octameric or hexadecameric functional state[4] |
| Product Synonyms(s) |
DNA-binding transcriptional dual regulator, leucine-binding[1], B0889[2][1], LstR[2][1], Mbf[2][1], OppI[2][1], RblA[2][1], Lss[2][1], Lrs[2][1], Ihb[2][1], Lrp[2][1], LivR[2][1], regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system.[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Feast/famine regulatory protein. Homodimers bind adjacent DNA binding sites to form functional octameric state. Lrp wraps DNA and probably plays a role in chromatin organization.[4]
References
- ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.