ompC:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''ompC'' | ''ompC'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK2207, b2215, JW2203, meoA, par''<ref name='LIB:Riley_2006'/> | ''ECK2207, b2215, JW2203, meoA, par''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
outer membrane porin OmpC<ref name='LIB:EcoCyc10.6'/>; OmpC<ref name='LIB:EcoCyc11.1'/>; | outer membrane porin OmpC<ref name='LIB:EcoCyc10.6'/>; OmpC<ref name='LIB:EcoCyc11.1'/>; | ||
| Line 43: | Line 43: | ||
Outer membrane porin C<ref name='LIB:EcoGene'/> | Outer membrane porin C<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
outer membrane porin protein C<ref name='LIB:Riley_2006'/>, B2215<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Par<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MeoA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, outer membrane porin OmpC<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> | outer membrane porin protein C<ref name='LIB:Riley_2006'/>, B2215<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Par<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MeoA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, OmpC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, outer membrane porin OmpC<ref name='LIB:EcoCyc11.1'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
'''Cellular Component''' | |||
* GO:0045203 integral to cell outer membrane ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:ompC|ompC]]<ref name='LIB:EcoCyc10.6'/>, OP00065 | transcription unit(s): [[:Category:Txn_unit:ompC|ompC]]<ref name='LIB:EcoCyc10.6'/>, OP00065 | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=ompC&loc=MG1655:2310771..2309668,W3110:2316083..2314980,REL606:2262685..2261750,DH10B:2401759..2400656 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2401759&end=2400656&gene=ompC&aa=mkvkvlsllvpallvagaanaaevynkdgnkldlygkvdglhyfsdnkdvdgdqtymrlgfkgetqvtdqltgygqweyqiqgnsaenennswtrvafaglkfqdvgsfdygrnygvvydvtswtdvlpefggdtygsdnfmqqrgngfatyrntdffglvdglnfavqyqgkngnpsgegftsgvtnngrdalrqngdgvggsitydyegfgiggaissskrtdaqntaayigngdraetytgglkydanniylaaqytqtynatrvgslgwankaqnfeavaqyqfdfglrpslaylqskgknlgrgyddedilkyvdvgatyyfnknmstyvdykinllddnqftrdagintdnivalglvyqf Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=ompC+AND+escherichia+coli Pubmed(ompC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=ompC Textpresso(ompC)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 23:38, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
ompC |
|---|---|
| Gene Synonym(s) |
ECK2207, b2215, JW2203, meoA, par[1] |
| Product Desc. |
outer membrane porin OmpC[2]; OmpC[3]; Component of outer membrane porin C[3] Outer membrane porin C[4] |
| Product Synonyms(s) |
outer membrane porin protein C[1], B2215[2][1], Par[2][1], MeoA[2][1], OmpC[2][1], outer membrane porin OmpC[3][1] |
| Function from GO |
Cellular Component
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Binds TrxA (Kumar, 2004). Mutants have elevated OM vesiculation (McBroom, 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.