pbpC:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''pbpC'' | ''pbpC'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2515, b2519, JW2503, yfgN''<ref name='LIB:Riley_2006'/> | ''ECK2515, b2519, JW2503, yfgN''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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putative peptidoglycan enzyme<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | putative peptidoglycan enzyme<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Penicillin-binding protein PBP1C murein transglycosylase<ref name='LIB:EcoGene'/> | Penicillin-binding protein PBP1C murein transglycosylase<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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fused transglycosylase<ref name='LIB:Riley_2006'/>, transpeptidase<ref name='LIB:Riley_2006'/>, B2519<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfgN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PbpC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PBP1C<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | fused transglycosylase<ref name='LIB:Riley_2006'/>, transpeptidase<ref name='LIB:Riley_2006'/>, B2519<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfgN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PbpC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PBP1C<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0008144 drug binding ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0008955 peptidoglycan glycosyltransferase activity ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:pbpC|pbpC]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:pbpC|pbpC]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=pbpC&loc=MG1655:2645347..2643035,W3110:2645981..2643669,REL606:2568144..2565832,DH10B:2737112..2734800 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2737112&end=2734800&gene=pbpC&aa=mprlltkrgcwitlaaapfllflaawgadklwplplhevnparvvvaqdgtplwrfadadgiwrypvtiedvsprylealinyedrwfwkhpgvnpfsvaraawqdltsgrvisggstltmqvarlldphpktfggkirqlwralqlewhlskreiltlylnrapfggtlqgigaaswaylgkspanlsyseaamlavlpqapsrlrpdrwperaeaarnkvlermavqgvwsreqvkesreepiwlaprqmpqlaplfsrmmlgksksdkitttldaglqrrleelaqnwkgrlpprsslamivvdhtdmrvrgwvgsvdlnddsrfghvdmvnsirspgsvlkpfvyglaldeglihpasllqdvprrtgdyrpgnfdsgfhgpismsealvrslnlpavqvleaygpkrfaaklrnvglplylpngaapnlslilggagakledmaaaytafarhgkagklrlqpddpllerplmssgaawiirrimadeaqplpdsalprvaplawktgtsygyrdawaigvnaryvigiwtgrpdgtpvvgqfgfasavpllnqvnnillsrsanlpedprpnsvtrgvicwpggqslpegdgncrrrlatwlldgsqpptlllpeqegingirfpiwldengkrvaadcpqarqeminvwplplepwlpaserravrlppastscppyghdaqlplqltgvrdgaiikrlpgaaeatlplqssggagerwwflngepltergrnvtlhltdkgdyqllvmddvgqiatvkfvmq Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pbpC+AND+escherichia+coli Pubmed(pbpC)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=pbpC Textpresso(pbpC)] | |||
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Revision as of 23:37, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
pbpC |
|---|---|
| Gene Synonym(s) |
ECK2515, b2519, JW2503, yfgN[1] |
| Product Desc. |
putative peptidoglycan enzyme[2][3] Penicillin-binding protein PBP1C murein transglycosylase[4] |
| Product Synonyms(s) |
fused transglycosylase[1], transpeptidase[1], B2519[2][1], YfgN[2][1], PbpC[2][1], PBP1C[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
PbpC has a penicillin-insensitive transglycosylase N-terminal domain. PbpC has a transpeptidase-like C-terminal domain that does not seem to be functional. PbpC is a membrane-bound periplasmic enzyme that has an uncleaved signal anchor[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.