rpsI:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rpsI'' | ''rpsI'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3219, b3230, JW3199''<ref name='LIB:Riley_2006'/> | ''ECK3219, b3230, JW3199''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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30S ribosomal subunit protein S9<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | 30S ribosomal subunit protein S9<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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30S ribosomal subunit protein S9<ref name='LIB:EcoGene'/> | 30S ribosomal subunit protein S9<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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30S ribosomal subunit protein S9<ref name='LIB:Riley_2006'/>, B3230<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | 30S ribosomal subunit protein S9<ref name='LIB:Riley_2006'/>, B3230<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsI<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
* GO:0003735 structural constituent of ribosome ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Biological Process''' | |||
* GO:0006412 translation ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rplM-rpsI|rplM-rpsI]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rplM-rpsI|rplM-rpsI]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rpsI&loc=MG1655:3376229..3375837,W3110:3378062..3377670,DH10B:3473974..3473582,REL606:3306105..3305713 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3306105&end=3305713&gene=rpsI&aa=maenqyygtgrrkssaarvfikpgngkivinqrsleqyfgretarmvvrqplelvdmvekldlyitvkgggisgqagairhgitralmeydeslrselrkagfvtrdarqverkkvglrkarrrpqfskr Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rpsI+AND+escherichia+coli Pubmed(rpsI)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rpsI Textpresso(rpsI)] | |||
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Revision as of 23:35, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rpsI |
|---|---|
| Gene Synonym(s) |
ECK3219, b3230, JW3199[1] |
| Product Desc. |
30S ribosomal subunit protein S9[2][3]; Component of 30S ribosomal subunit[2][3]; ribosome[2][3] 30S ribosomal subunit protein S9[4] |
| Product Synonyms(s) |
30S ribosomal subunit protein S9[1], B3230[2][1], RpsI[2][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
rpsI can be deleted, but null mutants grow slowly and express kanamycin resistance weakly (Bubunenko, 2007), which may explain why a deletion was not isolated by Baba (2006), leading to its misclassification as an essential gene.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.