rtcR:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''rtcR'' | ''rtcR'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3408, b3422, JW3385, yhgB''<ref name='LIB:Riley_2006'/> | ''ECK3408, b3422, JW3385, yhgB''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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RtcR transcriptional regulator<ref name='LIB:EcoCyc10.6'/>; RtcR transcriptional activator<ref name='LIB:EcoCyc11.1'/> | RtcR transcriptional regulator<ref name='LIB:EcoCyc10.6'/>; RtcR transcriptional activator<ref name='LIB:EcoCyc11.1'/> | ||
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Transcriptional regulator for rtcAB<ref name='LIB:EcoGene'/> | Transcriptional regulator for rtcAB<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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sigma 54-dependent transcriptional regulator of rtcBA expression<ref name='LIB:Riley_2006'/>, B3422<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhgB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RtcR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | sigma 54-dependent transcriptional regulator of rtcBA expression<ref name='LIB:Riley_2006'/>, B3422<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhgB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RtcR<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0016563 transcription activator activity ([http://www.geneontology.org/GO.evidence.shtml IEP]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:rtcR|rtcR]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:rtcR|rtcR]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=rtcR&loc=MG1655:3556290..3557888,W3110:4082148..4080550,REL606:3486868..3488466,DH10B:3654035..3655633 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3654035&end=3655633&gene=rtcR&aa=mrktvafgfvgtvldyagrgsqrwskwrptlclcqqeslvidrlellhdarsrslfetlkrdiasvspetevvsveielhnpwdfeevyaclhdfargyefqpekedylihittgthvaqicwfllaearylparliqsspprkkeqprgpgevtiidldlsrynaiasrfaeerqqtldflksgiatrnphfnrmieqiekvaiksrapillngptgagksflarrilelkqarhqfsgafvevncatlrgdtamstlfghvkgaftgaresregllrsanggmlfldeigelgadeqamllkaieektfypfgsdrqvssdfqliagtvrdlrqlvaegkfredlyarinlwtftlpglrqrqediepnldyeverhasltgdsvrfntearrawlafatspqatwrgnfrelsasvtrmatfatsgritldvvedeinrlrynwqesrpsaltallgaeaenidlfdrmqlehviaicrqakslsaagrqlfdvsrqgkasvndadrlrkylarfgltweavqdqhsss Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=rtcR+AND+escherichia+coli Pubmed(rtcR)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=rtcR Textpresso(rtcR)] | |||
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Revision as of 23:34, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
rtcR |
|---|---|
| Gene Synonym(s) |
ECK3408, b3422, JW3385, yhgB[1] |
| Product Desc. |
RtcR transcriptional regulator[2]; RtcR transcriptional activator[3] Transcriptional regulator for rtcAB[4] |
| Product Synonyms(s) |
sigma 54-dependent transcriptional regulator of rtcBA expression[1], B3422[2][1], YhgB[2][1], RtcR[2][1] |
| Function from GO |
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.