sdaB:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''sdaB''  
''sdaB''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2792, b2797, JW2768''<ref name='LIB:Riley_2006'/>
''ECK2792, b2797, JW2768''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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LSERINEDEAM2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
LSERINEDEAM2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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L-Serine deaminase II; L-SD2<ref name='LIB:EcoGene'/>
L-Serine deaminase II; L-SD2<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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L-serine deaminase II<ref name='LIB:Riley_2006'/>, B2797<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SdaB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-threonine deaminase II<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-serine deaminase 2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-serine dehydratase 2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SDH-2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-SD2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-serine hydro-lyase 2 (deaminating)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
L-serine deaminase II<ref name='LIB:Riley_2006'/>, B2797<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SdaB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-threonine deaminase II<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-serine deaminase 2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-serine dehydratase 2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SDH-2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-SD2<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, L-serine hydro-lyase 2 (deaminating)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI])
'''Biological Process'''
* GO:0006565 L-serine catabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:sdaCB|sdaCB]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:sdaCB|sdaCB]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=sdaB&loc=MG1655:2927598..2928965,W3110:2928232..2929599,REL606:2818505..2819872,DH10B:3021476..3022843 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3021476&end=3022843&gene=sdaB&aa=misvfdifkigigpssshtvgpmkagkqftddliarnllkdvtrvvvdvygslsltgkghhtdiaiimglagnlpdtvdidsipsfiqdvnthgrlmlangqhevefpvdqcmnfhadnlslhengmritalagdkvvysqtyysigggfivdeehfgqqdsapvevpypyssaadlqkhcqetglslsglmmknelalhskeeleqhlanvwevmrggiergistegvlpgklrvprraaalrrmlvsqdktttdpmavvdwinmfalavneenaaggrvvtaptngacgiipavlayydkfirevnanslaryllvasaigslykmnasisgaevgcqgevgvacsmaaaglaellgaspaqvciaaeiamehnlgltcdpvagqvqvpciernaiaavkavnaarmalrrtseprvcldkvietmyetgkdmnakyretsrgglamkivacd Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sdaB+AND+escherichia+coli Pubmed(sdaB)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=sdaB Textpresso(sdaB)]


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Revision as of 23:32, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

sdaB

Gene Synonym(s)

ECK2792, b2797, JW2768[1]

Product Desc.

LSERINEDEAM2[2][3]

L-Serine deaminase II; L-SD2[4]

Product Synonyms(s)

L-serine deaminase II[1], B2797[2][1], SdaB[2][1], L-threonine deaminase II[2][1], L-serine deaminase 2[2][1], L-serine dehydratase 2[2][1], SDH-2[2][1], L-SD2[2][1], L-serine hydro-lyase 2 (deaminating)[2][1]

Function from GO

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sdaCB[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(sdaB)    Textpresso(sdaB)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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Binds TrxA (Kumar, 2004).[4]



References

[back to top]


  1. ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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