secM:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''secM'' | ''secM'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0098, b0097, JW5007, srrA, yacA, gene X''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ''ECK0098, b0097, JW5007, srrA, yacA, gene X''<ref name='LIB:Riley_2006'/><ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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secretion monitor that regulates SecA translation (General Secretory Pathway)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | secretion monitor that regulates SecA translation (General Secretory Pathway)<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Secretion monitor controlling secA expression<ref name='LIB:EcoGene'/> | Secretion monitor controlling secA expression<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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regulator of secA translation<ref name='LIB:Riley_2006'/>, B0097<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SrrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SecM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YacA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Gene X<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | regulator of secA translation<ref name='LIB:Riley_2006'/>, B0097<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SrrA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SecM<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YacA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Gene X<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:secMA-mutT|secMA-mutT]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:secMA-mutT|secMA-mutT]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=secM&loc=MG1655:107705..108217,W3110:107705..108217,DH10B:81809..82321 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=81809&end=82321&gene=secM&aa=mlwtagfndkicalntfeydrdgnnvsgiltrwrqfgkryfwphlllgmvaaslglpalsnaaepnapakattrnhepsakvnfgqlalleantrrpnsnysvdywhqhairtvirhlsfamapqtlpvaeeslplqaqhlalldtlsalltqegtpsekgyridyahftpqakfstpvwisqaqgiragpqrlt Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=secM+AND+escherichia+coli Pubmed(secM)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=secM Textpresso(secM)] | |||
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Revision as of 23:32, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
secM |
|---|---|
| Gene Synonym(s) | |
| Product Desc. |
secretion monitor that regulates SecA translation (General Secretory Pathway)[2][3] Secretion monitor controlling secA expression[4] |
| Product Synonyms(s) |
regulator of secA translation[1], B0097[2][1], SrrA[2][1], SecM[2][1], YacA[2][1], Gene X[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): secMA-mutT[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Translation and secretion of SecM regulates downstream secA gene expression. First 37 aa are predicted signal peptide. The arrest sequence is 150-FXXXXWIXXXXGIRAGP-166. The arrested peptide ends with G165: P-166 encodes an arrest requirement for free Pro166-tRNA in the ribosomal peptidyl transferase A site (Muto 2006).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.