sixA:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''sixA''  
''sixA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2334, b2340, JW2337, yfcY, yfcW''<ref name='LIB:Riley_2006'/>
''ECK2334, b2340, JW2337, yfcY, yfcW''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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G7211<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
G7211<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Phosphohistidine phosphatase affecting ArcB H-D phosphorelay; targets Hpt domain<ref name='LIB:EcoGene'/>
Phosphohistidine phosphatase affecting ArcB H-D phosphorelay; targets Hpt domain<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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phosphohistidine phosphatase<ref name='LIB:Riley_2006'/>, B2340<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfcW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SixA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
phosphohistidine phosphatase<ref name='LIB:Riley_2006'/>, B2340<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YfcW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, SixA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Molecular Function'''
* GO:0008969 phosphohistidine phosphatase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0006464 protein modification process ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:sixA|sixA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:sixA|sixA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=sixA&loc=MG1655:2454834..2454349,W3110:2462258..2461773,REL606:2400476..2399991,DH10B:2546599..2546114 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2546599&end=2546114&gene=sixA&aa=mqvfimrhgdaaldaasdsvrplttngcdesrlmanwlkgqkveiervlvspflraeqtleevgdclnlpssaevlpeltpcgdvglvsaylqaltnegvasvlvishlplvgylvaelcpgetppmfttsaiasvtldesgngtfnwqmspcnlkmakai Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sixA+AND+escherichia+coli Pubmed(sixA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=sixA Textpresso(sixA)]


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Revision as of 23:31, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

sixA

Gene Synonym(s)

ECK2334, b2340, JW2337, yfcY, yfcW[1]

Product Desc.

G7211[2][3]

Phosphohistidine phosphatase affecting ArcB H-D phosphorelay; targets Hpt domain[4]

Product Synonyms(s)

phosphohistidine phosphatase[1], B2340[2][1], YfcW[2][1], SixA[2][1]

Function from GO

Cellular Component

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): sixA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(sixA)    Textpresso(sixA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


SixA overexpression also interferes with BarA Hpt function (Ogina, 1998). Other SixA substrates are possible but unknown.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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