sra:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''sra''  
''sra''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1474, b1480, JW5962, rpsV''<ref name='LIB:Riley_2006'/>
''ECK1474, b1480, JW5962, rpsV''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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30S ribosomal subunit protein S22<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
30S ribosomal subunit protein S22<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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SRA (stationary-phase-induced ribosome-associated) protein; Protein D; present in copy number/ribosome = 0.1 (exp) to 0.4 (stat); previously called 30S ribosomal subunit protein S22, RpsV<ref name='LIB:EcoGene'/>
SRA (stationary-phase-induced ribosome-associated) protein; Protein D; present in copy number/ribosome = 0.1 (exp) to 0.4 (stat); previously called 30S ribosomal subunit protein S22, RpsV<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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30S ribosomal subunit protein S22<ref name='LIB:Riley_2006'/>, B1480<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Sra<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Protein D<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
30S ribosomal subunit protein S22<ref name='LIB:Riley_2006'/>, B1480<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Sra<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, RpsV<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Protein D<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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!align=left {{table_heading_style}} |Knock-Out Phenotype
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Non-essential <ref name=PMID:17277072/>
Non-essential <ref name=PMID:17277072/>
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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:bdm-sra|bdm-sra]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:sra|sra]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:bdm-sra|bdm-sra]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:sra|sra]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=sra&loc=MG1655:1553987..1553850,W3110:1557677..1557540,DH10B:1644582..1644445,REL606:1529764..1529901 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1529764&end=1529901&gene=sra&aa=mksnrqarhilgldhkisnqrkivtegdkssvvnnptgrkrpaek Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=sra+AND+escherichia+coli Pubmed(sra)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=sra Textpresso(sra)]


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Revision as of 23:30, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

sra

Gene Synonym(s)

ECK1474, b1480, JW5962, rpsV[1]

Product Desc.

30S ribosomal subunit protein S22[2][3];

Component of 30S ribosomal subunit[2][3]; ribosome[2][3]

SRA (stationary-phase-induced ribosome-associated) protein; Protein D; present in copy number/ribosome = 0.1 (exp) to 0.4 (stat); previously called 30S ribosomal subunit protein S22, RpsV[4]

Product Synonyms(s)

30S ribosomal subunit protein S22[1], B1480[2][1], Sra[2][1], RpsV[2][1], Protein D[2][1]

Function from GO
Knock-Out Phenotype

Non-essential [5]

Regulation/Expression

transcription unit(s): bdm-sra[2], sra[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(sra)    Textpresso(sra)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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References

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  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Bubunenko, M et al. (2007) Essentiality of ribosomal and transcription antitermination proteins analyzed by systematic gene replacement in Escherichia coli. J. Bacteriol. 189 2844-53 PubMed
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