stpA:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''stpA'' | ''stpA'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2663, b2669, JW2644, hnsB, rsv''<ref name='LIB:Riley_2006'/> | ''ECK2663, b2669, JW2644, hnsB, rsv''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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H-NS-like DNA-binding protein with RNA chaperone activity<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | H-NS-like DNA-binding protein with RNA chaperone activity<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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RNA chaperone and DNA-binding protein; suppresses T4 td mutant; modulates micF stability; forms heteromers with, and stabilzed against proteolysis by, the paralogous H-NS protein; transcriptionally repressed by H-NS<ref name='LIB:EcoGene'/> | RNA chaperone and DNA-binding protein; suppresses T4 td mutant; modulates micF stability; forms heteromers with, and stabilzed against proteolysis by, the paralogous H-NS protein; transcriptionally repressed by H-NS<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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DNA binding protein, nucleoid-associated<ref name='LIB:Riley_2006'/>, B2669<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HnsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, StpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | DNA binding protein, nucleoid-associated<ref name='LIB:Riley_2006'/>, B2669<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, HnsB<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, StpA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:stpA|stpA]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:stpA|stpA]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=stpA&loc=MG1655:2796517..2796113,W3110:2797151..2796747,REL606:2693248..2692844,DH10B:2888282..2887878 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2888282&end=2887878&gene=stpA&aa=msvmlqslnnirtlramarefsidvleemlekfrvvtkerreeeeqqqrelaerqekistwlelmkadginpeellgnssaaapragkkrqprpakykftdvngetktwtgqgrtpkpiaqalaegkslddfli Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=stpA+AND+escherichia+coli Pubmed(stpA)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=stpA Textpresso(stpA)] | |||
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Revision as of 23:30, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
stpA |
|---|---|
| Gene Synonym(s) |
ECK2663, b2669, JW2644, hnsB, rsv[1] |
| Product Desc. |
H-NS-like DNA-binding protein with RNA chaperone activity[2][3] RNA chaperone and DNA-binding protein; suppresses T4 td mutant; modulates micF stability; forms heteromers with, and stabilzed against proteolysis by, the paralogous H-NS protein; transcriptionally repressed by H-NS[4] |
| Product Synonyms(s) |
DNA binding protein, nucleoid-associated[1], B2669[2][1], HnsB[2][1], StpA[2][1] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Nucleoid-associated protein.
StpA binds prefereably unstructured RNA weakly, with mainly electrostatic interactions that promote RNA folding (Mayer, 2007).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.