tdcD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''tdcD'' | ''tdcD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK3104, b3115, JW5806, yhaA''<ref name='LIB:Riley_2006'/> | ''ECK3104, b3115, JW5806, yhaA''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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Propionate kinase, anaerobic; non-essential gene<ref name='LIB:EcoGene'/> | Propionate kinase, anaerobic; non-essential gene<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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propionate kinase/acetate kinase C, anaerobic<ref name='LIB:Riley_2006'/>, B3115<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TdcD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | propionate kinase/acetate kinase C, anaerobic<ref name='LIB:Riley_2006'/>, B3115<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YhaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TdcD<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
'''Biological Process''' | |||
* GO:0006567 threonine catabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0019665 anaerobic amino acid catabolic process ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:tdcABCDEFG|tdcABCDEFG]]<ref name='LIB:EcoCyc10.6'/>, OP00167, tdcABC | transcription unit(s): [[:Category:Txn_unit:tdcABCDEFG|tdcABCDEFG]]<ref name='LIB:EcoCyc10.6'/>, OP00167, tdcABC | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=tdcD&loc=MG1655:3261694..3260474,W3110:3263515..3262220,DH10B:3359439..3358219,REL606:3196706..3195486 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3196706&end=3195486&gene=tdcD&aa=mrkemnefpvvlvincgsssikfsvldasdcevlmsgiadginsenaflsvnggepaplahhsyegalkaiafelekrnlndsvalighriahggsiftesaiitdevidnirrvsplaplhnyanlsgiesaqqlfpgvtqvavfdtsfhqtmapeaylyglpwkyyeelgvrrygfhgtshryvsqrahsllnlaeddsglvvahlgngasicavrngqsvdtsmgmtpleglmmgtrsgdvdfgamswvasqtnqslgdlervvnkesgllgisglssdlrvlekawhegheraqlaiktfvhriarhiaghaaslrrldgiiftggigensslirrlvmehlavlgleidtemnnrsnscgerivssenarvicaviptneekmialdaihlgkvnapaefa Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tdcD+AND+escherichia+coli Pubmed(tdcD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=tdcD Textpresso(tdcD)] | |||
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Revision as of 23:29, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
tdcD |
|---|---|
| Gene Synonym(s) |
ECK3104, b3115, JW5806, yhaA[1] |
| Product Desc. |
Propionate kinase, anaerobic; non-essential gene[2] |
| Product Synonyms(s) |
propionate kinase/acetate kinase C, anaerobic[1], B3115[3][1], YhaA[3][1], TdcD[3][1] |
| Function from GO |
Molecular Function
Biological Process
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): tdcABCDEFG[3], OP00167, tdcABC |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
otherPDB (S. typhimurium): 1X3M, 1X3N.[2]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
- ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7