tig:Quickview: Difference between revisions
Jump to navigation
Jump to search
Update TableEdit tables. |
update QV table |
||
| Line 27: | Line 27: | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Standard Name | ||
|| | || | ||
''tig'' | ''tig'' | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
|| | || | ||
''ECK0430, b0436, JW0426''<ref name='LIB:Riley_2006'/> | ''ECK0430, b0436, JW0426''<ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
|| | || | ||
trigger factor; a molecular chaperone involved in cell division<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | trigger factor; a molecular chaperone involved in cell division<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
| Line 41: | Line 41: | ||
Trigger factor, protein folding chaperone; also peptidyl-prolyl cis-trans isomerase; interacts with nascent polypeptide chains<ref name='LIB:EcoGene'/> | Trigger factor, protein folding chaperone; also peptidyl-prolyl cis-trans isomerase; interacts with nascent polypeptide chains<ref name='LIB:EcoGene'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
|| | || | ||
peptidyl-prolyl cis/trans isomerase (trigger factor)<ref name='LIB:Riley_2006'/>, B0436<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tig<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | peptidyl-prolyl cis/trans isomerase (trigger factor)<ref name='LIB:Riley_2006'/>, B0436<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, Tig<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Function from GO | ||
|| | || | ||
'''Molecular Function''' | |||
* GO:0005515 protein binding ([http://www.geneontology.org/GO.evidence.shtml IPI]) | |||
'''Cellular Component''' | |||
* GO:0005624 membrane fraction ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0005739 mitochondrion ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
|| | |||
|- | |||
!align=left {{table_heading_style}} |Regulation/Expression | |||
|| | || | ||
transcription unit(s): [[:Category:Txn_unit:tig|tig]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:tig|tig]]<ref name='LIB:EcoCyc10.6'/> | ||
|- | |- | ||
!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
|| | || | ||
|- | |||
!align=left {{table_heading_style}} |Quick Links | |||
|| | |||
[http://ecoliwiki.net/tools/display_dna.php?gene=tig&loc=MG1655:454357..455655,W3110:454357..455655,DH10B:393688..394986,REL606:425838..427136 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=425838&end=427136&gene=tig&aa=mqvsvettqglgrrvtitiaadsietavkselvnvakkvridgfrkgkvpmnivaqrygasvrqdvlgdlmsrnfidaiikekinpagaptyvpgeyklgedftysvefevypevelqgleaievekpivevtdadvdgmldtlrkqqatwkekdgaveaedrvtidftgsvdgeefeggkasdfvlamgqgrmipgfedgikghkageeftidvtfpeeyhaenlkgkaakfainlkkveerelpeltaefikrfgvedgsveglraevrknmerelksairnrvksqaieglvkandidvpaalidseidvlrrqaaqrfggnekqalelprelfeeqakrrvvvglllgevirtnelkadeervkglieemasayedpkeviefysknkelmdnmrnvaleeqaveavlakakvtekettfnelmnqqa Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tig+AND+escherichia+coli Pubmed(tig)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=tig Textpresso(tig)] | |||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Revision as of 23:28, 21 January 2010
{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>
| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
tig |
|---|---|
| Gene Synonym(s) |
ECK0430, b0436, JW0426[1] |
| Product Desc. |
trigger factor; a molecular chaperone involved in cell division[2][3] Trigger factor, protein folding chaperone; also peptidyl-prolyl cis-trans isomerase; interacts with nascent polypeptide chains[4] |
| Product Synonyms(s) |
peptidyl-prolyl cis/trans isomerase (trigger factor)[1], B0436[2][1], Tig[2][1] |
| Function from GO |
Molecular Function
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
dnaK and tig mutants are synthetic lethal at 30 degrees C, however, no lethal effects are observed at 23 degrees C. Overproduction of GroEL/GroES at 30 degrees C supresses synthetic lethality.[4]
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.