tilS:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''tilS'' | ''tilS'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0187, b0188, JW0183, mesJ, yaeN''<ref name='LIB:Riley_2006'/> | ''ECK0187, b0188, JW0183, mesJ, yaeN''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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G6096<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | G6096<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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tRNA(Ile) lysidine (L34) synthase, ATP-dependent; solely responsible for tRNA(Ile) lysidine 34 (L34) formation<ref name='LIB:EcoGene'/> | tRNA(Ile) lysidine (L34) synthase, ATP-dependent; solely responsible for tRNA(Ile) lysidine 34 (L34) formation<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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tRNA(Ile)-lysidine synthetase<ref name='LIB:Riley_2006'/>, B0188<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MesJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TilS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | tRNA(Ile)-lysidine synthetase<ref name='LIB:Riley_2006'/>, B0188<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YaeN<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MesJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, TilS<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0006400 tRNA modification ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
'''Molecular Function''' | |||
* GO:0032267 tRNA(Ile)-lysidine synthase ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:tilS|tilS]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:tilS|tilS]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=tilS&loc=MG1655:212331..213629,W3110:212331..213629,DH10B:186435..187733,REL606:215173..216471 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=215173&end=216471&gene=tilS&aa=mtltlnrqlltsrqilvafsggldstvllhqlvqwrtenpgvalraihvhhglsanadawvthcenvcqqwqvplvvervqlaqeglgieaqarqaryqafartllpgevlvtaqhlddqcetfllalkrgsgpaglsamaevsefagtrlirpllartrgelvqwarqydlrwiedesnqddsydrnflrlrvvpllqqrwphfaeatarsaalcaeqeslldelladdlahcqspqgtlqivpmlamsdarraaiirrwlagqnapmpsrdalvriwqevalaredaspclrlgafeirryqsqlwwiksvtgqsenivpwqtwlqplelpaglgsvqlnaggdirppradeavsvrfkapgllhivgrnggrklkkiwqelgvppwlrdttpllfygetliaaagvfvtqegvaegengvsfvwqktls Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=tilS+AND+escherichia+coli Pubmed(tilS)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=tilS Textpresso(tilS)] | |||
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Revision as of 23:28, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
tilS |
|---|---|
| Gene Synonym(s) |
ECK0187, b0188, JW0183, mesJ, yaeN[1] |
| Product Desc. |
tRNA(Ile) lysidine (L34) synthase, ATP-dependent; solely responsible for tRNA(Ile) lysidine 34 (L34) formation[4] |
| Product Synonyms(s) |
tRNA(Ile)-lysidine synthetase[1], B0188[2][1], YaeN[2][1], MesJ[2][1], TilS[2][1] |
| Function from GO |
Biological Process
Molecular Function
|
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
YaeN (TilS) is mistakenly labeled as a cell cycle gene in many databases. the confusion arose from the misinterpretation of Genbank Z50870. the real "minE suppressor" is the small rof gene next to tilS, labeled as orf4 in Z50870. PDB: 1NI5. Gu M., Burling T., Lima C.D., Structure of the MesJ PP-ATPase from Escherichia coli, unpublished. tilS is an essential gene. AFMB Structural Genomics target No. 121 (http://afmb.cnrs-mrs.fr/article171.html).[4]
References
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.