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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''uxaA''  
''uxaA''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK3082, b3091, JW3062, ygjW''<ref name='LIB:Riley_2006'/>
''ECK3082, b3091, JW3062, ygjW''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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D-Altronate hydrolase (hydratase), Fe(2)-requiring; galacturonate branch of hexuronate pathway<ref name='LIB:EcoGene'/>
D-Altronate hydrolase (hydratase), Fe(2)-requiring; galacturonate branch of hexuronate pathway<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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altronate hydrolase<ref name='LIB:Riley_2006'/>, B3091<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgjW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UxaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
altronate hydrolase<ref name='LIB:Riley_2006'/>, B3091<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, YgjW<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, UxaA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0008198 ferrous iron binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Biological Process'''
* GO:0019698 D-galacturonate catabolic process ([http://www.geneontology.org/GO.evidence.shtml IMP])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:uxaCA|uxaCA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:uxaCA|uxaCA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=uxaA&loc=MG1655:3241336..3239849,W3110:3241970..3240483,REL606:3176348..3174861,DH10B:3339081..3337594 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=3339081&end=3337594&gene=uxaA&aa=mqyikihaldnvavaladlaegtevsvdnqtvtlrqdvarghkfaltdiakganvikyglpigyaladiaagvhvhahntrtnlsdldqyryqpdfqdlpaqaadrevqiyrrangdvgvrnelwilptvgcvngiarqiqnrflketnnaegtdgvflfshtygcsqlgddhintrtmlqnmvrhpnagavlviglgcennqvaafretlgdidpervhfmicqqqddeieagiehlhqlynvmrndkrepgklselkfglecggsdglsgitanpmlgrfsdyvianggttvltevpemfgaeqllmdhcrdeatfeklvtmvndfkqyfiahdqpiyenpspgnkaggittledkslgctqkagssvvvdvlrygerlktpglnllsapgndavatsalagagchmvlfstgrgtpyggfvptvkiatnselaakkkhwidfdagqlihgkampqlleefidtivefangkqtcnerndfrelaifksgvtl Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=uxaA+AND+escherichia+coli Pubmed(uxaA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=uxaA Textpresso(uxaA)]


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Revision as of 23:25, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

uxaA

Gene Synonym(s)

ECK3082, b3091, JW3062, ygjW[1]

Product Desc.

D-Altronate hydrolase (hydratase), Fe(2)-requiring; galacturonate branch of hexuronate pathway[2]

Product Synonyms(s)

altronate hydrolase[1], B3091[3][1], YgjW[3][1], UxaA[3][1]

Function from GO

Molecular Function

Biological Process

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): uxaCA[3]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(uxaA)    Textpresso(uxaA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


ExuR regulon. UxaA is paralogous to GarD and contains a conserved CxxS redox motif. The unprocessed tisB pre-mRNA functions as an antisense RNA regulator of uxaA, resulting in cleavage of uxaA mRNA at the antisense site and also reciprocal cleavage and activation of the tisB pre-mRNA (forming the +42 tisB RNA) (Weel-Sneve, 2008).[2]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  3. ↑ 3.0 3.1 3.2 3.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
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