yniC:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''yniC''  
''yniC''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK1725, b1727, JW1716''<ref name='LIB:Riley_2006'/>
''ECK1725, b1727, JW1716''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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2-deoxyglucose-6-phosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
2-deoxyglucose-6-phosphatase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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2-deoxyglucose-6-P phosphatase; mutants are hypersensitive to 2-deoxyglucose; overproduction confers 2-deoxyglucose resistance; additional in vitro substrates: mannose-6-P phosphate, 2-deoxyribose-5-P, ribose-5-P, glucose-6-P; HAD1<ref name='LIB:EcoGene'/>
2-deoxyglucose-6-P phosphatase; mutants are hypersensitive to 2-deoxyglucose; overproduction confers 2-deoxyglucose resistance; additional in vitro substrates: mannose-6-P phosphate, 2-deoxyribose-5-P, ribose-5-P, glucose-6-P; HAD1<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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predicted hydrolase<ref name='LIB:Riley_2006'/>, YniC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1727<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted hydrolase<ref name='LIB:Riley_2006'/>, YniC<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B1727<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Molecular Function'''
* GO:0004346 glucose-6-phosphatase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0050308 sugar-phosphatase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0003850 2-deoxyglucose-6-phosphatase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0016791 phosphatase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0046872 metal ion binding ([http://www.geneontology.org/GO.evidence.shtml IDA])
'''Cellular Component'''
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml IDA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:yniC|yniC]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:yniC|yniC]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=yniC&loc=MG1655:1807404..1808072,W3110:1811094..1811762,DH10B:1897975..1898643,REL606:1786645..1787313 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1786645&end=1787313&gene=yniC&aa=mstprqilaaifdmdgllidseplwdraeldvmaslgvdisrrnelpdtlglridmvvdlwyarqpwngpsrqevverviaraislveetrpllpgvreavalckeqgllvglasasplhmlekvltmfdlrdsfdalasaeklpyskphpqvyldcaaklgvdpltcvaledsvngmiaskaarmrsivvpapeaqndprfvladvklsslteltakdllg Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=yniC+AND+escherichia+coli Pubmed(yniC)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=yniC Textpresso(yniC)]


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Revision as of 22:52, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

yniC

Gene Synonym(s)

ECK1725, b1727, JW1716[1]

Product Desc.

2-deoxyglucose-6-phosphatase[2][3]

2-deoxyglucose-6-P phosphatase; mutants are hypersensitive to 2-deoxyglucose; overproduction confers 2-deoxyglucose resistance; additional in vitro substrates: mannose-6-P phosphate, 2-deoxyribose-5-P, ribose-5-P, glucose-6-P; HAD1[4]

Product Synonyms(s)

predicted hydrolase[1], YniC[2][1], B1727[2][1]

Function from GO

Molecular Function

Cellular Component

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): yniC[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(yniC)    Textpresso(yniC)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


In vitro activities and phenotypes demonstrated by Kuznetsova et al. (2005, 2006). HAD superfamily. HT_Cmplx36_Cyt: Mog+YniC.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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