ybhA:Quickview: Difference between revisions

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!align=left {{table_heading_style}} |Standard Name
!align=left |Standard Name
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''ybhA''  
''ybhA''  
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!align=left {{table_heading_style}} |Gene Synonym(s)
!align=left |Gene Synonym(s)
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''ECK0755, b0766, JW0749, modD''<ref name='LIB:Riley_2006'/>
''ECK0755, b0766, JW0749, modD''<ref name='LIB:Riley_2006'/>
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!align=left {{table_heading_style}} |Product Desc.
!align=left |Product Desc.
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EG11239<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
EG11239<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
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Pyridoxal phosphate (PLP) phosphatase; phosphoramidase; physiological role unknown; HAD14<ref name='LIB:EcoGene'/>
Pyridoxal phosphate (PLP) phosphatase; phosphoramidase; physiological role unknown; HAD14<ref name='LIB:EcoGene'/>
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!align=left {{table_heading_style}} |Product Synonyms(s)
!align=left |Product Synonyms(s)
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predicted hydrolase<ref name='LIB:Riley_2006'/>, YbhA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0766<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, fructose 1,6-bisphosphatase III<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
predicted hydrolase<ref name='LIB:Riley_2006'/>, YbhA<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B0766<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, fructose 1,6-bisphosphatase III<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left {{table_heading_style}} |Knock-Out Phenotype
!align=left |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
!align=left |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:ybhA|ybhA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:ybhA|ybhA]]<ref name='LIB:EcoCyc10.6'/>  
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!align=left {{table_heading_style}} |Regulation/Activity
!align=left |Regulation/Activity
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Revision as of 01:29, 10 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

ybhA

Gene Synonym(s)

ECK0755, b0766, JW0749, modD[1]

Product Desc.

EG11239[2][3]

Pyridoxal phosphate (PLP) phosphatase; phosphoramidase; physiological role unknown; HAD14[4]

Product Synonyms(s)

predicted hydrolase[1], YbhA[2][1], B0766[2][1], fructose 1,6-bisphosphatase III[2][1]

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): ybhA[2]

Regulation/Activity


edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


HAD superfamily. In vitro activities demonstrated by Kuznetsova et al. (2005, 2006). ybhA is a non-essential gene.[4]

HAD refers to the haloacid dehalogenase-like (HAD) family of proteins.[5].



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
  5. ↑ Koonin, EV & Tatusov, RL (1994) Computer analysis of bacterial haloacid dehalogenases defines a large superfamily of hydrolases with diverse specificity. Application of an iterative approach to database search. J. Mol. Biol. 244 125-32 PubMed
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