phoQ:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''phoQ'' | ''phoQ'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK1115, b1129, JW1115''<ref name='LIB:Riley_2006'/> | ''ECK1115, b1129, JW1115''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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PhoQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | PhoQ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/> | ||
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Response to extracellular divalent cations, pH, and acetate; two-component response regulator, cognate to phoP<ref name='LIB:EcoGene'/> | Response to extracellular divalent cations, pH, and acetate; two-component response regulator, cognate to phoP<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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B1129<ref name='LIB:EcoCyc10.6'/>, sensor protein PhoQ<ref name='LIB:EcoCyc10.6'/>, sensor kinase-phosphotransferase PhoQ<ref name='LIB:EcoCyc10.6'/> | B1129<ref name='LIB:EcoCyc10.6'/>, sensor protein PhoQ<ref name='LIB:EcoCyc10.6'/>, sensor kinase-phosphotransferase PhoQ<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:phoPQ|phoPQ]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:phoPQ|phoPQ]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=phoQ&loc=MG1655:1188999..1187539,W3110:1191353..1189893,DH10B:1244444..1242984,REL606:1205146..1203686 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=1205146&end=1203686&gene=phoQ&aa=mkkllrlffplslrvrfllataavvlvlslaygmvaligysvsfdkttfrllrgesnlfytlakwennklhvelpenidkqsptmtliydengqllwaqrdvpwlmkmiqpdwlksngfheieadvndtslllsgdhsiqqqlqevreddddaemthsvavnvypatsrmpkltivvvdtipvelkssymvwswfiyvlsanlllvipllwvaawwslrpiealakevreleehnrellnpattreltslvrnlnrllksererydkyrttltdlthslktplavlqstlrslrsekmsvsdaepvmleqisrisqqigyylhrasmrggtllsrelhpvaplldnltsalnkvyqrkgvnisldispeisfvgeqndfvevmgnvldnackyclefveisarqtdehlyivveddgpgiplskrevifdrgqrvdtlrpgqgvglavareiteqyegkivagesmlggarmevifgrqhsapkde Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=phoQ+AND+escherichia+coli Pubmed(phoQ)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=phoQ Textpresso(phoQ)] | |||
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Revision as of 00:18, 22 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
phoQ |
|---|---|
| Gene Synonym(s) |
ECK1115, b1129, JW1115[1] |
| Product Desc. |
Response to extracellular divalent cations, pH, and acetate; two-component response regulator, cognate to phoP[4] |
| Product Synonyms(s) |
B1129[2], sensor protein PhoQ[2], sensor kinase-phosphotransferase PhoQ[2] |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
PhoPQ has been primarily characterized in Salmonella, with significant differences from E. coli. Mg(2+) stimulon-PhoPQ regulon, EvgAS-PhoPQ cascade enhanced-expression subset.[4]
References
- ↑ Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.