pepA:Quickview: Difference between revisions

From EcoliWiki
Jump to navigation Jump to search
← Older editNewer edit →
Update TableEdit tables.
update QV table
Line 27: Line 27:


|-
|-
!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
||
||
''pepA''  
''pepA''  
|-
|-
!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
||
||
''ECK4253, b4260, JW4217, carP, xerB''<ref name='LIB:Riley_2006'/>
''ECK4253, b4260, JW4217, carP, xerB''<ref name='LIB:Riley_2006'/>
|-
|-
!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
||
||
PepA Transcriptional Repressor, Aminopeptidase A/I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
PepA Transcriptional Repressor, Aminopeptidase A/I<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>
Line 41: Line 41:
Multifunctional Aminopeptidase A; transcriptional regulator of carAB; non-peptidase, DNA-binding role in site-specific recombination mediating ColE1 plasmid multimer resolution; homohexameric<ref name='LIB:EcoGene'/>
Multifunctional Aminopeptidase A; transcriptional regulator of carAB; non-peptidase, DNA-binding role in site-specific recombination mediating ColE1 plasmid multimer resolution; homohexameric<ref name='LIB:EcoGene'/>
|-
|-
!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
||
||
aminopeptidase A, a cyteinylglycinase product<ref name='LIB:Riley_2006'/>, PepA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B4260 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XerB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CarP product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
aminopeptidase A, a cyteinylglycinase product<ref name='LIB:Riley_2006'/>, PepA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, B4260 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, XerB product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, CarP product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
|-
|-
!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
||
||
'''Biological Process'''
* GO:0006350 transcription ([http://www.geneontology.org/GO.evidence.shtml IDA,IMP])
'''Molecular Function'''
* GO:0016564 transcription repressor activity ([http://www.geneontology.org/GO.evidence.shtml IDA,IMP])
* GO:0004177 aminopeptidase activity ([http://www.geneontology.org/GO.evidence.shtml IDA])
* GO:0003677 DNA binding ([http://www.geneontology.org/GO.evidence.shtml IDA])


|-
|-
!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
||
 
|-
!align=left {{table_heading_style}} |Regulation/Expression
||
||
transcription unit(s): [[:Category:Txn_unit:pepA|pepA]]<ref name='LIB:EcoCyc10.6'/>  
transcription unit(s): [[:Category:Txn_unit:pepA|pepA]]<ref name='LIB:EcoCyc10.6'/>  
|-
|-
!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
||
||


|-
!align=left {{table_heading_style}} |Quick Links
||
[http://ecoliwiki.net/tools/display_dna.php?gene=pepA&loc=MG1655:4483974..4482463,W3110:4490631..4489120,REL606:4469178..4467667,DH10B:4585782..4584271 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=4585782&end=4584271&gene=pepA&aa=mefsvksgspekqrsacivvgvfeprrlspiaeqldkisdgyisallrrgelegkpgqtlllhhvpnvlserilligcgkerelderqykqviqktintlndtgsmeavcfltelhvkgrnnywkvrqavetaketlysfdqlktnkseprrplrkmvfnvptrreltsgeraiqhglaiaagikaakdlgnmppnicnaaylasqarqladsysknvitrvigeqqmkelgmhsylavgqgsqneslmsvieykgnasedarpivlvgkgltfdsggisikpsegmdemkydmcgaaavygvmrmvaelqlpinvigvlagcenmpggrayrpgdvlttmsgqtvevlntdaegrlvlcdvltyverfepeavidvatltgacvialghhitglmanhnplaheliaaseqsgdrawrlplgdeyqeqlesnfadmaniggrpggaitagcflsrftrkynwahldiagtawrsgkakgatgrpvallaqfllnragfngee Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pepA+AND+escherichia+coli Pubmed(pepA)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=pepA Textpresso(pepA)]


|- class="tableEdit_footer"  
|- class="tableEdit_footer"  

Revision as of 23:36, 21 January 2010

{{#css:Suppresslinks.css}}<css>h1 .editsection { display:none;} h2 .editsection { display:none;}</css>

Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

pepA

Gene Synonym(s)

ECK4253, b4260, JW4217, carP, xerB[1]

Product Desc.

PepA Transcriptional Repressor, Aminopeptidase A/I[2][3]

Multifunctional Aminopeptidase A; transcriptional regulator of carAB; non-peptidase, DNA-binding role in site-specific recombination mediating ColE1 plasmid multimer resolution; homohexameric[4]

Product Synonyms(s)

aminopeptidase A, a cyteinylglycinase product[1], PepA product[2][1], B4260 product[2][1], XerB product[2][1], CarP product[2][1]

Function from GO

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): pepA[2]

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(pepA)    Textpresso(pepA)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

[back to top]


PepA has a broad specificity for successive removal of many N-terminal amino acids, although leucine is preferred as the residue N-terminal to the cleavage site.[4]



References

[back to top]


  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
Retrieved from "https://ecoliwiki.org/colipedia/index.php?title=pepA:Quickview&oldid=1030881"