pdxJ:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''pdxJ'' | ''pdxJ'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK2562, b2564, JW2548''<ref name='LIB:Riley_2006'/> | ''ECK2562, b2564, JW2548''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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pyridoxine 5'-phosphate synthase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | pyridoxine 5'-phosphate synthase<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Pyridoxine 5'-phosphate (PNP) synthase; homo-octamer<ref name='LIB:EcoGene'/> | Pyridoxine 5'-phosphate (PNP) synthase; homo-octamer<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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pyridoxine 5'-phosphate synthase<ref name='LIB:Riley_2006'/>, B2564<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PdxJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | pyridoxine 5'-phosphate synthase<ref name='LIB:Riley_2006'/>, B2564<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, PdxJ<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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'''Biological Process''' | |||
* GO:0008615 pyridoxine biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IMP]) | |||
'''Cellular Component''' | |||
* GO:0005829 cytosol ([http://www.geneontology.org/GO.evidence.shtml IDA]) | |||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:pdxJ-acpS|pdxJ-acpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:rnc-era-recO-pdxJ-acpS|rnc-era-recO-pdxJ-acpS]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:pdxJ-acpS|pdxJ-acpS]]<ref name='LIB:EcoCyc10.6'/>, [[:Category:Txn_unit:rnc-era-recO-pdxJ-acpS|rnc-era-recO-pdxJ-acpS]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=pdxJ&loc=MG1655:2699751..2699020,W3110:2700385..2699654,REL606:2623221..2622490,DH10B:2791516..2790785 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2791516&end=2790785&gene=pdxJ&aa=maelllgvnidhiatlrnargtaypdpvqaafiaeqagadgitvhlredrrhitdrdvrilrqtldtrmnlemavteemlaiavetkphfcclvpekrqevtteggldvagqrdkmrdackrladagiqvslfidadeeqikaaaevgapfieihtgcyadaktdaeqaqelariakaatfaaslglkvnaghgltyhnvkaiaaipemhelnighaiigravmtglkdavaemkrlmlearg Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=pdxJ+AND+escherichia+coli Pubmed(pdxJ)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=pdxJ Textpresso(pdxJ)] | |||
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Revision as of 23:36, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
pdxJ |
|---|---|
| Gene Synonym(s) |
ECK2562, b2564, JW2548[1] |
| Product Desc. |
pyridoxine 5'-phosphate synthase[2][3]; Component of pyridoxine 5'-phosphate synthase[3] Pyridoxine 5'-phosphate (PNP) synthase; homo-octamer[4] |
| Product Synonyms(s) |
pyridoxine 5'-phosphate synthase[1], B2564[2][1], PdxJ[2][1] |
| Function from GO |
Biological Process
Cellular Component
|
| Knock-Out Phenotype | |
| Regulation/Expression |
transcription unit(s): pdxJ-acpS[2], rnc-era-recO-pdxJ-acpS[2] |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
References
- ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 2.3 2.4 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.