panD:Quickview: Difference between revisions
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!align=left | !align=left {{table_heading_style}} |Standard Name | ||
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''panD'' | ''panD'' | ||
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!align=left | !align=left {{table_heading_style}} |Gene Synonym(s) | ||
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''ECK0130, b0131, JW0127''<ref name='LIB:Riley_2006'/> | ''ECK0130, b0131, JW0127''<ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Desc. | ||
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PanD α & β cleavage products<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | PanD α & β cleavage products<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>; | ||
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Aspartate 1-decarboxylase; pantothenate biosynthesis; residues 1-24 cleaved, constitute the beta chain; C-terminal (102aa) constitutes alpha chain<ref name='LIB:EcoGene'/> | Aspartate 1-decarboxylase; pantothenate biosynthesis; residues 1-24 cleaved, constitute the beta chain; C-terminal (102aa) constitutes alpha chain<ref name='LIB:EcoGene'/> | ||
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!align=left | !align=left {{table_heading_style}} |Product Synonyms(s) | ||
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aspartate 1-decarboxylase<ref name='LIB:Riley_2006'/>, B0131<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | aspartate 1-decarboxylase<ref name='LIB:Riley_2006'/>, B0131<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/> | ||
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!align=left | !align=left {{table_heading_style}} |Function from GO | ||
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!align=left | !align=left {{table_heading_style}} |Knock-Out Phenotype | ||
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!align=left {{table_heading_style}} |Regulation/Expression | |||
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transcription unit(s): [[:Category:Txn_unit:panD|panD]]<ref name='LIB:EcoCyc10.6'/> | transcription unit(s): [[:Category:Txn_unit:panD|panD]]<ref name='LIB:EcoCyc10.6'/> | ||
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!align=left | !align=left {{table_heading_style}} |Regulation/Activity | ||
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!align=left {{table_heading_style}} |Quick Links | |||
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[http://ecoliwiki.net/tools/display_dna.php?gene=panD&loc=MG1655:146694..146314,W3110:146694..146314,DH10B:120798..120418,REL606:149497..149117 DNA display] [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=149497&end=149117&gene=panD&aa=mirtmlqgklhrvkvthadlhyegscaidqdfldaagileneaidiwnvtngkrfstyaiaaergsriisvngaaahcasvgdiviiasfvtmpdeeartwrpnvayfegdnemkrtakaipvqva Protein display] [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=panD+AND+escherichia+coli Pubmed(panD)] [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=panD Textpresso(panD)] | |||
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Revision as of 23:37, 21 January 2010
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| Quickview | Gene | Gene Product(s) | Expression | Evolution | On One Page |
| References | Suggestions |
See Help:Quickview for help with entering information in the Quickview table.
| Standard Name |
panD |
|---|---|
| Gene Synonym(s) |
ECK0130, b0131, JW0127[1] |
| Product Desc. |
PanD α & β cleavage products[2][3]; Component of aspartate 1-decarboxylase[3] Aspartate 1-decarboxylase; pantothenate biosynthesis; residues 1-24 cleaved, constitute the beta chain; C-terminal (102aa) constitutes alpha chain[4] |
| Product Synonyms(s) | |
| Function from GO | |
| Knock-Out Phenotype | |
| Regulation/Expression | |
| Regulation/Activity | |
| Quick Links | |
| edit table |
See Help:Quickview for help with entering information in the Quickview table.
Notes
Mutants have altered acyl-CoA pools. N-terminus of alpha subunit (Ser25) is modified to pyruvic acid and involved in catalysis. Replacing normally modified Ser25 with an alanine inactivates PanD. Sequencing citation: Merkel,W.K. and Nichols,B.P., Nucleotide sequence of the Escherichia coli panBCD gene cluster, unpublished (1993) as cited in GenBank accession number L17086. Aspartate decarboxylase activity was confirmed in K-12 when it was first shown to be PanD (Cronan, 1980).[4]
References
- ↑ 1.0 1.1 1.2 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
- ↑ 2.0 2.1 2.2 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 3.0 3.1 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
- ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.