nrdF:Quickview: Difference between revisions

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!align=left |Standard Name
!align=left {{table_heading_style}} |Standard Name
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''nrdF''  
''nrdF''  
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!align=left |Gene Synonym(s)
!align=left {{table_heading_style}} |Gene Synonym(s)
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''ECK2670, b2676, JW2651''<ref name='LIB:Riley_2006'/>
''ECK2670, b2676, JW2651''<ref name='LIB:Riley_2006'/>
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!align=left |Product Desc.
!align=left {{table_heading_style}} |Product Desc.
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NrdF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
NrdF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>;  
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Ribonucleoside diphosphate reductase 2, subunit beta, class I<ref name='LIB:EcoGene'/>
Ribonucleoside diphosphate reductase 2, subunit beta, class I<ref name='LIB:EcoGene'/>
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!align=left |Product Synonyms(s)
!align=left {{table_heading_style}} |Product Synonyms(s)
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ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like<ref name='LIB:Riley_2006'/>, B2676<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NrdF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like<ref name='LIB:Riley_2006'/>, B2676<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, NrdF<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>  
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!align=left |Knock-Out Phenotype
!align=left {{table_heading_style}} |Function from GO
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'''Cellular Component'''
* GO:0005971 ribonucleoside-diphosphate reductase complex ([http://www.geneontology.org/GO.evidence.shtml IGI])
* GO:0005737 cytoplasm ([http://www.geneontology.org/GO.evidence.shtml ISA])
'''Biological Process'''
* GO:0009263 deoxyribonucleotide biosynthetic process ([http://www.geneontology.org/GO.evidence.shtml IGI])
'''Molecular Function'''
* GO:0004748 ribonucleoside-diphosphate reductase activity ([http://www.geneontology.org/GO.evidence.shtml IGI])
* GO:0005506 iron ion binding ([http://www.geneontology.org/GO.evidence.shtml ISA])


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!align=left |Regulation/Expression
!align=left {{table_heading_style}} |Knock-Out Phenotype
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!align=left {{table_heading_style}} |Regulation/Expression
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transcription unit(s): [[:Category:Txn_unit:nrdHIEF|nrdHIEF]]<ref name='LIB:EcoCyc10.6'/>, nrdEF  
transcription unit(s): [[:Category:Txn_unit:nrdHIEF|nrdHIEF]]<ref name='LIB:EcoCyc10.6'/>, nrdEF  
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!align=left |Regulation/Activity
!align=left {{table_heading_style}} |Regulation/Activity
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!align=left {{table_heading_style}} |Quick Links
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[http://ecoliwiki.net/tools/display_dna.php?gene=nrdF&loc=MG1655:2801524..2802483,W3110:2802158..2803117,REL606:2698254..2699213,DH10B:2893289..2894248 DNA display]&nbsp;&nbsp;&nbsp; [http://ecoliwiki.net/tools/display_protein.php?f=NC_000913&start=2893289&end=2894248&gene=nrdF&aa=mklsrisainwnkisddkdlevwnrltsnfwlpekvplsndipawqtltvveqqltmrvftgltlldtlqnvigapslmpdaltpheeavlsnisfmeavharsyssifstlcqtkdvdaayawseenaplqrkaqiiqqhyrgddplkkkiasvflesflfysgfwlpmyfssrgkltntadlirliirdeavhgyyigykyqknmekislgqreelksfafdlllelydnelqytdelyaetpwaddvkaflcynankalmnlgyeplfpaemaevnpailaalspnadenhdffsgsgssyvmgkavetededwnf Protein display]&nbsp;&nbsp;&nbsp; [http://www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed&cmd=Search&Term=nrdF+AND+escherichia+coli Pubmed(nrdF)]&nbsp;&nbsp;&nbsp; [http://trimer.tamu.edu/cgi-bin/textpresso/2.1/ecoli/search?searchstring=nrdF Textpresso(nrdF)]


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Revision as of 23:39, 21 January 2010

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Quickview   Gene   Gene Product(s)   Expression   Evolution   On One Page    
References Suggestions

See Help:Quickview for help with entering information in the Quickview table.

Standard Name

nrdF

Gene Synonym(s)

ECK2670, b2676, JW2651[1]

Product Desc.

NrdF[2][3];

Component of ribonucleoside-diphosphate reductase 2, β subunit dimer[2][3]; ribonucleoside-diphosphate reductase 2[2][3]

Ribonucleoside diphosphate reductase 2, subunit beta, class I[4]

Product Synonyms(s)

ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like[1], B2676[2][1], NrdF[2][1]

Function from GO

Cellular Component

Biological Process

Molecular Function

Knock-Out Phenotype
Regulation/Expression

transcription unit(s): nrdHIEF[2], nrdEF

Regulation/Activity
Quick Links

DNA display    Protein display    Pubmed(nrdF)    Textpresso(nrdF)

edit table

See Help:Quickview for help with entering information in the Quickview table.

Notes

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nrdF is a nonessential gene.[4]



References

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  1. ↑ 1.0 1.1 1.2 1.3 Riley, M. et al. (2006) Nucleic Acids Res 34:1-6 (corrected supplemental data from B. Wanner)
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 EcoCyc (release 10.6; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  3. ↑ 3.0 3.1 3.2 EcoCyc (release 11.1; 2007) Keseler, IM et al. (2005) Nucleic Acids Res. 33(Database issue):D334-7
  4. ↑ 4.0 4.1 EcoGene: Rudd, KE (2000) EcoGene: a genome sequence database for Escherichia coli K-12. Nucleic Acids Res 28:60-4.
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